RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 AASSQ9UDR5 926 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 NAP1L2Q9ULW6 460 aaPredicted RBP3.96□□□□□ -1.78
BRCA1-229ENST00000621897 MRPS28Q9Y2Q9 187 aaKnown RBP3.96□□□□□ -1.78
BRCA1-229ENST00000621897 PYGO1Q9Y3Y4 419 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 TP53BP1Q12888 1972 aaPredicted RBP3.96□□□□□ -1.78
BRCA1-229ENST00000621897 FRMD3A2A2Y4 597 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 KRTAP16-1A8MUX0 517 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 J3KRW8 73 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 GPR137BO60478 399 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 TMCC2O75069 709 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 GPC4O75487 556 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 OR2C1O95371 312 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 NGFP01138 241 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 FAM200BP0CF97 657 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 CLK1P49759 484 aaKnown RBP3.95□□□□□ -1.78
BRCA1-229ENST00000621897 EIF5P55010 431 aaKnown RBP3.95□□□□□ -1.78
BRCA1-229ENST00000621897 ITGA9Q13797 1035 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 FAM133BQ5BKY9 247 aaKnown RBP3.95□□□□□ -1.78
BRCA1-229ENST00000621897 ZDHHC20Q5W0Z9 365 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 KLHL35Q6PF15 583 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 ZSCAN30Q86W11 494 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 PLD3Q8IV08 490 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 HCAR2Q8TDS4 363 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 UCMAQ8WVF2 138 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 CMTM3Q96MX0 182 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 ZNF582Q96NG8 517 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-229ENST00000621897 DDOQ99489 341 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 ALDH8A1Q9H2A2 487 aaPredicted RBP3.95□□□□□ -1.78
BRCA1-229ENST00000621897 FGF22Q9HCT0 170 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 DIAPH3Q9NSV4 1193 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 INTS10Q9NVR2 710 aaKnown RBP3.95□□□□□ -1.78
BRCA1-229ENST00000621897 TMEM181Q9P2C4 612 aa3.95□□□□□ -1.78
BRCA1-229ENST00000621897 A0A1W2PRQ8 180 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 HS6ST1O60243 411 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 CSPG5O95196 566 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 DDX58O95786 925 aaKnown RBP3.94□□□□□ -1.78
BRCA1-229ENST00000621897 CLPTM1O96005 669 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 FRMD6-AS1P0C7T7 363 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 ACP2P11117 423 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 ACTN1P12814 892 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 LAMP2P13473 410 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 TMEM11P17152 192 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 ITGA3P26006 1051 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 PPARGP37231 505 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-229ENST00000621897 CAMPP49913 170 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 IRX1P78414 480 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-229ENST00000621897 DDX10Q13206 875 aaKnown RBP3.94□□□□□ -1.78
BRCA1-229ENST00000621897 KRT32Q14532 448 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 ISCA2Q86U28 154 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 L3MBTL4Q8NA19 623 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 DDHD1Q8NEL9 900 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 ZNF653Q96CK0 615 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 SLC22A12Q96S37 553 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 UNC45AQ9H3U1 944 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 DENND2DQ9H6A0 471 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-229ENST00000621897 ZNF71Q9NQZ8 489 aaPredicted RBP3.94□□□□□ -1.78
BRCA1-229ENST00000621897 RASAL2Q9UJF2 1139 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 CMAHPQ9Y471 501 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 RUSC2Q8N2Y8 1516 aa3.94□□□□□ -1.78
BRCA1-229ENST00000621897 IGKV3D-20A0A0C4DH25 116 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 A0A1W2PR77 199 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 OR6C76A6NM76 312 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 FIBPO43427 364 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 CRLF1O75462 422 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 RPN1P04843 607 aaKnown RBP3.93□□□□□ -1.78
BRCA1-229ENST00000621897 SRPRAP08240 638 aaKnown RBP3.93□□□□□ -1.78
BRCA1-229ENST00000621897 NMBRP28336 390 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 MAPK4P31152 587 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 LUMP51884 338 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-229ENST00000621897 IKQ13123 557 aaPredicted RBP3.93□□□□□ -1.78
BRCA1-229ENST00000621897 HAUS3Q68CZ6 603 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 KLC3Q6P597 504 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 CFAP161Q6P656 301 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 SARM1Q6SZW1 724 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 IKBIPQ70UQ0 350 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 WDTC1Q8N5D0 677 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 OLIG1Q8TAK6 271 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 ZNF622Q969S3 477 aaKnown RBP eCLIP3.93□□□□□ -1.78
BRCA1-229ENST00000621897 PRAC1Q96KF2 57 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 SRSF8Q9BRL6 282 aaKnown RBP3.93□□□□□ -1.78
BRCA1-229ENST00000621897 SH2D4AQ9H788 454 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 KAT14Q9H8E8 782 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 COQ3Q9NZJ6 369 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 FBXL17Q9UF56 701 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 SESN1Q9Y6P5 492 aa3.93□□□□□ -1.78
BRCA1-229ENST00000621897 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.93□□□□□ -1.78
BRCA1-229ENST00000621897 TDRD9Q8NDG6 1382 aaKnown RBP3.92□□□□□ -1.78
BRCA1-229ENST00000621897 TPPPO94811 219 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 GH2P01242 217 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 PLA2G4BP0C869 781 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 KRT5P13647 590 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 GABRB1P18505 474 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 CHMP24386 653 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 PON1P27169 355 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 CDH11P55287 796 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 GAGE2BQ13066 116 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 TUBB2AQ13885 445 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 LPAL2Q16609 132 aa3.92□□□□□ -1.78
BRCA1-229ENST00000621897 GTDC1Q4AE62 458 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms