RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 KLHL6Q8WZ60 621 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 ARL8AQ96BM9 186 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 ZSCAN5AQ9BUG6 496 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 ADGRE3Q9BY15 652 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 TRIM39Q9HCM9 518 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 SLAMF7Q9NQ25 335 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 LUC7LQ9NQ29 371 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 LUZP4Q9P127 313 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 ZNF624Q9P2J8 865 aaPredicted RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 SLC23A2Q9UGH3 650 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 AMACRQ9UHK6 382 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 G3BP2Q9UN86 482 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 MAP4K5Q9Y4K4 846 aa7.68□□□□□ -1.18
CLK1-215ENST00000621181 PCDHGA9Q9Y5G4 932 aaKnown RBP7.68□□□□□ -1.18
CLK1-215ENST00000621181 A0A0A6YYK5 440 aaPredicted RBP7.67□□□□□ -1.18
CLK1-215ENST00000621181 ARGFXA6NJG6 315 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 TCP11X1B4DZS4 312 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 GOLGA8KD6RF30 607 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 DDX3XO00571 662 aaKnown RBP eCLIP7.67□□□□□ -1.18
CLK1-215ENST00000621181 CHUKO15111 745 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 MTX2O75431 263 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 SORBS2O94875 1100 aaKnown RBP7.67□□□□□ -1.18
CLK1-215ENST00000621181 DDAH2O95865 285 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 HLA-DQB2P05538 268 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 FAM153BP0C7A2 387 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 FOLR1P15328 257 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 ZNF7P17097 686 aaPredicted RBP7.67□□□□□ -1.18
CLK1-215ENST00000621181 ARL4DP49703 201 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 GALNT2Q10471 571 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 MRPL49Q13405 166 aaKnown RBP7.67□□□□□ -1.18
CLK1-215ENST00000621181 INPP5JQ15735 1006 aaPredicted RBP7.67□□□□□ -1.18
CLK1-215ENST00000621181 CHRNA6Q15825 494 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 IFI16Q16666 785 aaKnown RBP7.67□□□□□ -1.18
CLK1-215ENST00000621181 FAM153CQ494X1 144 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 CCDC181Q5TID7 509 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 C8orf74Q6P047 294 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 FAM199XQ6PEV8 388 aaPredicted RBP7.67□□□□□ -1.18
CLK1-215ENST00000621181 ADGRG6Q86SQ4 1221 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 PACS2Q86VP3 889 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 RBM12BQ8IXT5 1001 aaKnown RBP7.67□□□□□ -1.18
CLK1-215ENST00000621181 IFT20Q8IY31 132 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 RASGEF1CQ8N431 466 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 TTC13Q8NBP0 860 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 ARRDC2Q8TBH0 407 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 ACTRT1Q8TDG2 376 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 MAML1Q92585 1016 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 GLYATL1Q969I3 302 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 RUFY1Q96T51 708 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 SLC29A3Q9BZD2 475 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 ZFYVE1Q9HBF4 777 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 EPHA6Q9UF33 1036 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 FAM153AQ9UHL3 310 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 INTUQ9ULD6 942 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 RRP15Q9Y3B9 282 aaKnown RBP7.67□□□□□ -1.18
CLK1-215ENST00000621181 LRBAP50851 2863 aa7.67□□□□□ -1.18
CLK1-215ENST00000621181 IGHV5-51A0A0C4DH38 117 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 MYO1CO00159 1063 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 DPM1O60762 260 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 CDK14O94921 469 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 CD48P09326 243 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 BRAFP15056 766 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 VCLP18206 1134 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 IDSP22304 550 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 CCNCP24863 283 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 VARSP26640 1264 aaKnown RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 CD86P42081 329 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 HALP42357 657 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 DCDC1P59894 354 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 PPP1CAP62136 330 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 SLC25A11Q02978 314 aaKnown RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 ACY1Q03154 408 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 NIPAL4Q0D2K0 466 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 IL10RAQ13651 578 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 GALNT3Q14435 633 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 TRADDQ15628 312 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 QPCTQ16769 361 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 PRR30Q53SZ7 412 aaPredicted RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 NCBP2-AS2Q69YL0 99 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 ZNF787Q6DD87 383 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 JMJD6Q6NYC1 403 aaPredicted RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 KLHL35Q6PF15 583 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 ABRAXAS1Q6UWZ7 409 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 MAMDC2Q7Z304 686 aaPredicted RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 BPHLQ86WA6 291 aaPredicted RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 TRAPPC5Q8IUR0 188 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 TMEM126BQ8IUX1 230 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 TTC30BQ8N4P2 665 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 CCNYQ8ND76 341 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 GPR26Q8NDV2 337 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 FAM76AQ8TAV0 307 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 LRRN4Q8WUT4 740 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 PBKQ96KB5 322 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 FCRL4Q96PJ5 515 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 TIMM29Q9BSF4 260 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 AKIRIN1Q9H9L7 192 aaPredicted RBP7.66□□□□□ -1.18
CLK1-215ENST00000621181 MLXIPLQ9NP71 852 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 FGF21Q9NSA1 209 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 DTLQ9NZJ0 730 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 ANAPC7Q9UJX3 599 aa7.66□□□□□ -1.18
CLK1-215ENST00000621181 SHOC2Q9UQ13 582 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms