RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 ALDH3B2P48448 385 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 ARPP19P56211 112 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 CHFRQ96EP1 664 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 KCTD14Q9BQ13 255 aaPredicted RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 PTGFRNQ9P2B2 879 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 ZNF222Q9UK12 451 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 NAALAD2Q9Y3Q0 740 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 RPLP2P05387 115 aaKnown RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 SAGP10523 405 aaPredicted RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 YBX3P16989 372 aaKnown RBP eCLIP3.04□□□□□ -1.92
NEB-220ENST00000618972 AQP4P55087 323 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 GRK1Q15835 563 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 TRIM2Q9C040 744 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 REEP1Q9H902 201 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 SLAMF8Q9P0V8 285 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 ITSN2Q9NZM3 1697 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 ERCC6L2Q5T890 1561 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 C5orf51A6NDU8 294 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 TSTD3H0UI37 97 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 M0QZ92 97 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 SCELO95171 688 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 HALP42357 657 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 MAP2K4P45985 399 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 IL5RAQ01344 420 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 SLCO6A1Q86UG4 719 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 MFSD6LQ8IWD5 586 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 CCDC106Q9BWC9 280 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 TDRD1Q9BXT4 1180 aaKnown RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 HCN2Q9UL51 889 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 TEX13CA0A0J9YWL9 993 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 A0A1B0GVI7 797 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 SOWAHBA6NEL2 793 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 AGAP5A6NIR3 686 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 OAZ2O95190 189 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 CCNB1P14635 433 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 CXCR2P25025 360 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 SLC5A2P31639 672 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 ARF5P84085 180 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 PCBP1Q15365 356 aaKnown RBP eCLIP3.04□□□□□ -1.92
NEB-220ENST00000618972 RAP1GAP2Q684P5 730 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 MMAAQ8IVH4 418 aaKnown RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 DPEP3Q9H4B8 488 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 GAREM1Q9H706 876 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 MYO9BQ13459 2157 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 ABCC2Q92887 1545 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 AURKAO14965 403 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 POLR1CO15160 346 aaPredicted RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 RGS10O43665 173 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 DLX3O60479 287 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 CPEP16870 476 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 CHRNA4P43681 627 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 RGS6P49758 472 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 HDDC3Q8N4P3 179 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 FNDC5Q8NAU1 212 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 OR6B3Q8NGW1 331 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 EXT2Q93063 718 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 RCN3Q96D15 328 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 ADAM28Q9UKQ2 775 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 DYRK3O43781 588 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 SNAPINO95295 136 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 VTNP04004 478 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 UGT1A4P22310 534 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 UGT1A3P35503 534 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 UGT1A5P35504 534 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 ZNF252P-AS1Q0IIN9 211 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 PTCHD4Q6ZW05 846 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 KLHL8Q9P2G9 620 aaPredicted RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 VAPBO95292 243 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 PAICSP22234 425 aaKnown RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 MMP12P39900 470 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 HMGCS2P54868 508 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 LAMTOR4Q0VGL1 99 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 CYP1B1Q16678 543 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 KIAA1324Q6UXG2 1013 aaKnown RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 DHRS1Q96LJ7 313 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 FDXACB1Q9BRP7 624 aaPredicted RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 ENTPD7Q9NQZ7 604 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 REV1Q9UBZ9 1251 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 MST1RQ04912 1400 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 LRRTM2O43300 516 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 RFPL3O75679 317 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 CCNDBP1O95273 360 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 PEX2P28328 305 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 SMARCB1Q12824 385 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 LAPTM4AQ15012 233 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 GLYATQ6IB77 296 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 FAM109BQ6ICB4 259 aaPredicted RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 THAP6Q8TBB0 222 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 PMM1Q92871 262 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 ASIC4Q96FT7 647 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 GSDMCQ9BYG8 508 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 KCNN3Q9UGI6 736 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 SHOC2Q9UQ13 582 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 MEMO1Q9Y316 297 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 ATG4BQ9Y4P1 393 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 YTHDF2Q9Y5A9 579 aaKnown RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 DNMT3AQ9Y6K1 912 aaPredicted RBP3.04□□□□□ -1.92
NEB-220ENST00000618972 SPATA31C2B4DYI2 1134 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 SLITRK5O94991 958 aa3.04□□□□□ -1.92
NEB-220ENST00000618972 LBPP18428 481 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms