RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 TAPT1Q6NXT6 567 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 CLHC1Q8NHS4 586 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 NR4A3Q92570 626 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 IPPKQ9H8X2 491 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 GBA2Q9HCG7 927 aaPredicted RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 FKBP14Q9NWM8 211 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 HACL1Q9UJ83 578 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 RSL1D1O76021 490 aaKnown RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 ALDH1A2O94788 518 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 RPS14P62263 151 aaKnown RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 PIGGQ5H8A4 983 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 C6orf141Q5SZD1 244 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 KIAA1614Q5VZ46 1190 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 ARMC6Q6NXE6 501 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 SLC38A4Q969I6 547 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 PYURFQ96I23 114 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 OSMRQ99650 979 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 MAGIXQ9H6Y5 334 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 SEMA3GQ9NS98 782 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 NFKBIL1Q9UBC1 381 aaPredicted RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 MAGED1Q9Y5V3 778 aaPredicted RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 DLX3O60479 287 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 SLC19A2O60779 497 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 FGBP02675 491 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 CTSHP09668 335 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 DARSP14868 501 aaKnown RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 FMO3P31513 532 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 ICAM3P32942 547 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 GRIA1P42261 906 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 SNAPC1Q16533 368 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 GARNL3Q5VVW2 1013 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 SIGLEC10Q96LC7 697 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 GAD1Q99259 594 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 SLC29A3Q9BZD2 475 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.13□□□□□ -0.796e-7■■■■□ 20.5
CUL4A-212ENST00000617546 LIN28AQ9H9Z2 209 aaKnown RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 RABL2AQ9UBK7 228 aaPredicted RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 RABL2BQ9UNT1 228 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 MAB21L2Q9Y586 359 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 AURKAO14965 403 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 NUAK1O60285 661 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 NOBOXO60393 691 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 PBX3P40426 434 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 TUFMP49411 452 aaKnown RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 SMCO1Q147U7 214 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 TMEM132BQ14DG7 1078 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 MSS51Q4VC12 460 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 C9orf57Q5W0N0 161 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 DET1Q7L5Y6 550 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 SYVN1Q86TM6 617 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 ZC3HC1Q86WB0 502 aaKnown RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 FAM20CQ8IXL6 584 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 GPR65Q8IYL9 337 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 KLHL6Q8WZ60 621 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 DDX1Q92499 740 aaKnown RBP10.13□□□□□ -0.79
CUL4A-212ENST00000617546 CEP295NLQ96MC4 621 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 ATP13A3Q9H7F0 1226 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 MEAF6Q9HAF1 191 aa10.13□□□□□ -0.79
CUL4A-212ENST00000617546 A0A0G2JPF8 293 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 A0A0X1KG70 313 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 HNRNPCL3B7ZW38 293 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 CXCL11O14625 94 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 HNRNPCL4P0DMR1 293 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 CDK4P11802 303 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 PTGER3P43115 390 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 SKP1P63208 163 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 HSD17B12Q53GQ0 312 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 LCN8Q6JVE9 175 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 GALNT13Q8IUC8 556 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 CPNE9Q8IYJ1 553 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 LIX1Q8N485 282 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 CNDP2Q96KP4 475 aaKnown RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 TOR3AQ9H497 397 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 CALML5Q9NZT1 146 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 RUVBL1Q9Y265 456 aaKnown RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 PCDHB3Q9Y5E6 796 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 PITPNM1O00562 1244 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 ENTPD6O75354 484 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 VNN1O95497 513 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 HSD17B1P14061 328 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 EPORP19235 508 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 F8A1P23610 371 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 SLC1A2P43004 574 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 ASPAP45381 313 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 ABHD18Q0P651 414 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 SIX1Q15475 284 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 SNAP47Q5SQN1 464 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 WSCD1Q658N2 575 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 STEAP4Q687X5 459 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 DEF8Q6ZN54 512 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 FIBCD1Q8N539 461 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 ZBTB2Q8N680 514 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 ZNF431Q8TF32 576 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 TFAP2BQ92481 460 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 MRPL45Q9BRJ2 306 aaKnown RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 AGO3Q9H9G7 860 aaKnown RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 SNTG1Q9NSN8 517 aa10.12□□□□□ -0.79
CUL4A-212ENST00000617546 RIMS1Q86UR5 1692 aaKnown RBP10.12□□□□□ -0.79
CUL4A-212ENST00000617546 I3L521 148 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms