RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 FKBPLQ9UIM3 349 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 KCND3Q9UK17 655 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 PADI1Q9ULC6 663 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 KCTD3Q9Y597 815 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 RPS6KL1Q9Y6S9 549 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 CFAP46Q8IYW2 2715 aa9.46□□□□□ -0.9
TARDBP-218ENST00000617172 COL6A6A6NMZ7 2263 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 ZNF462Q96JM2 2506 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 OR5K3A6NET4 321 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 TLCD2A6NGC4 264 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 ERI2A8K979 691 aaKnown RBP9.45□□□□□ -0.9
TARDBP-218ENST00000617172 MATN2O00339 956 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 QSOX1O00391 747 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 NKX2-8O15522 239 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 LDB2O43679 373 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 SLC28A2O43868 658 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 KIF1CO43896 1103 aaKnown RBP9.45□□□□□ -0.9
TARDBP-218ENST00000617172 SPAG6O75602 509 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 GAS8O95995 478 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 TCN2P20062 427 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 PBLDP30039 288 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-218ENST00000617172 CA5AP35218 305 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 CD151P48509 253 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 ARL4DP49703 201 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 SH3BP2P78314 561 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 HSD11B2P80365 405 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 RPA4Q13156 261 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 KLF1Q13351 362 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-218ENST00000617172 LAMB3Q13751 1172 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 SPARCL1Q14515 664 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 SKIDA1Q1XH10 827 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 DNTTIP2Q5QJE6 756 aaKnown RBP9.45□□□□□ -0.9
TARDBP-218ENST00000617172 CAPRIN2Q6IMN6 1127 aaKnown RBP9.45□□□□□ -0.9
TARDBP-218ENST00000617172 AADACL2Q6P093 401 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 ATG14Q6ZNE5 492 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 FAM92BQ6ZTR7 304 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 OOSP2Q86WS3 158 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 UNC5BQ8IZJ1 945 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 OR13C4Q8NGS5 318 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 OR8K5Q8NH50 307 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 SLC35B2Q8TB61 432 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 HM13Q8TCT9 377 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 STYXQ8WUJ0 223 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 APOBEC4Q8WW27 367 aaKnown RBP9.45□□□□□ -0.9
TARDBP-218ENST00000617172 SEC14L1Q92503 715 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 STAMBPL1Q96FJ0 436 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 HES6Q96HZ4 224 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 C12orf66Q96MD2 445 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 FAM118BQ9BPY3 351 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 TSGA10Q9BZW7 698 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 WWP1Q9H0M0 922 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 NLE1Q9NVX2 485 aaPredicted RBP9.45□□□□□ -0.9
TARDBP-218ENST00000617172 ZDHHC3Q9NYG2 299 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 SLC24A2Q9UI40 661 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 RARRES3Q9UL19 164 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 HELZ2Q9BYK8 2649 aaKnown RBP9.45□□□□□ -0.9
TARDBP-218ENST00000617172 PIEZO2Q9H5I5 2752 aa9.45□□□□□ -0.9
TARDBP-218ENST00000617172 GCN1Q92616 2671 aaKnown RBP9.44□□□□□ -0.9
TARDBP-218ENST00000617172 IGLV3-16A0A075B6K0 115 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 IGHV5-51A0A0C4DH38 117 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 TRBV5-4A0A0C4DH59 114 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 F8W8V4 182 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 IFRD1O00458 451 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-218ENST00000617172 DDX3YO15523 660 aaKnown RBP9.44□□□□□ -0.9
TARDBP-218ENST00000617172 MAP3K7O43318 606 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 KIAA0754O94854 1291 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 AP2A2O94973 939 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 METTL18O95568 372 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 ZBTB11O95625 1053 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-218ENST00000617172 AP2A1O95782 977 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 FTCDO95954 541 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 POLBP06746 335 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 ACRV1P26436 265 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 MC4RP32245 332 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 POLE2P56282 527 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 CACNG1Q06432 222 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 CDC20Q12834 499 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 PRKAA1Q13131 559 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 KCNAB2Q13303 367 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 TUBB3Q13509 450 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 OLIG2Q13516 323 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 SEPT6Q14141 434 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 ZRANB3Q5FWF4 1079 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 TMTC4Q5T4D3 741 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 TAS2R42Q7RTR8 314 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 PRICKLE2Q7Z3G6 844 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 TMEM139Q8IV31 216 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 D2HGDHQ8N465 521 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 ACVR1CQ8NER5 493 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 SPDYE1Q8NFV5 336 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-218ENST00000617172 GPR150Q8NGU9 434 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 STARD8Q92502 1023 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 CDKN2AIPNLQ96HQ2 116 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 TTC1Q99614 292 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 MAP3K3Q99759 626 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 TMEM121Q9BTD3 319 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 MVB12BQ9H7P6 319 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 SYTL2Q9HCH5 934 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 FGF21Q9NSA1 209 aa9.44□□□□□ -0.9
TARDBP-218ENST00000617172 IL17BQ9UHF5 180 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms