RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 AGMOQ6ZNB7 445 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 C7orf43Q8WVR3 580 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 CRELD1Q96HD1 420 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 PIWIL1Q96J94 861 aaKnown RBP10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 TBC1D17Q9HA65 648 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 MAP4K5Q9Y4K4 846 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 ZNF780BQ9Y6R6 833 aa10.52□□□□□ -0.72
CLTCL1-209ENST00000617103 A0A0G2JPF8 293 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 HNRNPCL3B7ZW38 293 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 GADD45GO95257 159 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 DLDP09622 509 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 HNRNPCL4P0DMR1 293 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 IRF9Q00978 393 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 DSC2Q02487 901 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 TATDN1Q6P1N9 297 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 EPGNQ6UW88 154 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 TMEM110Q86TL2 294 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 GALNT12Q8IXK2 581 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 MYO19Q96H55 970 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 PPP1R16AQ96I34 528 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 GLIS2Q9BZE0 524 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 MED11Q9P086 117 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 NEMP2A6NFY4 417 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 URADA6NGE7 173 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 NME6O75414 186 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 AKR1A1P14550 325 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 SSR2P43308 183 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 CACNG1Q06432 222 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 FOXM1Q08050 763 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 TCEA2Q15560 299 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 DPY19L1Q2PZI1 675 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF404Q494X3 552 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 C9orf64Q5T6V5 341 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 RAET1GQ6H3X3 334 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 FAM171BQ6P995 826 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 ADGRG6Q86SQ4 1221 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 SLITRK4Q8IW52 837 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 RBM12BQ8IXT5 1001 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 ADAMTS15Q8TE58 950 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 C1QTNF7Q9BXJ2 289 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 ITPAQ9BY32 194 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 RNF38Q9H0F5 515 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 ADARB2Q9NS39 739 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 MALT1Q9UDY8 824 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 ASF1AQ9Y294 204 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 PCDHGB3Q9Y5G1 929 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 CLTCQ00610 1675 aaKnown RBP10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 CCL22O00626 93 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 FAM189A1O60320 539 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 ABCB7O75027 752 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 CLDN11O75508 207 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC2A2P11168 524 aaPredicted RBP10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 HDCP19113 662 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC1A2P43004 574 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 GLUD2P49448 558 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 HERVK_113P63132 956 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 PCDH1Q08174 1060 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 SMU1Q2TAY7 513 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 ADNP2Q6IQ32 1131 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 CLIP4Q8N3C7 705 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 CERS5Q8N5B7 392 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 POF1BQ8WVV4 589 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 AP2M1Q96CW1 435 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 FAXDC2Q96IV6 333 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 FEM1CQ96JP0 617 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 ERVK-6Q9BXR3 956 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 C11orf16Q9NQ32 467 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 CNTN3Q9P232 1028 aa10.52□□□□□ -0.73
CLTCL1-209ENST00000617103 DIP2CQ9Y2E4 1556 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 GLYATL1P3A0A0U1RQE8 302 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ILVBLA1L0T0 632 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 I3L521 148 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 MSI1O43347 362 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 CPNE3O75131 537 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 INMTO95050 263 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 GOT2P00505 430 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 PEPDP12955 493 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 MAPK9P45984 424 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 GSK3BP49841 420 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 HNRNPDQ14103 355 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 IKBKEQ14164 716 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 DPYSL2Q16555 572 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 RTL4Q6ZR62 310 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 C17orf64Q86WR6 236 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ISOC1Q96CN7 298 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 TMEM209Q96SK2 561 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 RSPH9Q9H1X1 276 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 TFB2MQ9H5Q4 396 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ELL3Q9HB65 397 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ZBTB26Q9HCK0 441 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 STARD7Q9NQZ5 370 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 DPP7Q9UHL4 492 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 TEX264Q9Y6I9 313 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 IGLV3-22A0A075B6J6 115 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 HTRA2O43464 458 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 OR10H2O60403 315 aa10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 ERN1O75460 977 aaKnown RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 CHRM5P08912 532 aaPredicted RBP10.51□□□□□ -0.73
CLTCL1-209ENST00000617103 SAGP10523 405 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms