RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 EDN1P05305 212 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 BIKQ13323 160 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC30A9Q6PML9 568 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 CCDC81Q6ZN84 652 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 HIST3H2AQ7L7L0 130 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 FAM129CQ86XR2 697 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 ZDHHC13Q8IUH4 622 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 TTC9BQ8N6N2 239 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 FIBINQ8TAL6 211 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 FBXO30Q8TB52 745 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 TMEM174Q8WUU8 243 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 HIST1H2ACQ93077 130 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 PTCD3Q96EY7 689 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 EFCAB11Q9BUY7 163 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 KIFC1Q9BW19 673 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 SIRPGQ9P1W8 387 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 FAM159BA6NKW6 160 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 MTX2O75431 263 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 OR4F21O95013 312 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 HNRNPCP07910 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 NTSR1P30989 418 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 DPYSQ14117 519 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 METTL21CQ5VZV1 264 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 ARMCX6Q7L4S7 300 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 STK32CQ86UX6 486 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 GATAD2AQ86YP4 633 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 SETD9Q8NE22 299 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 ADAMTS15Q8TE58 950 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 IMP4Q96G21 291 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 HIC2Q96JB3 615 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 GATA5Q9BWX5 397 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 CD248Q9HCU0 757 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 DDX18Q9NVP1 670 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 SPATA6Q9NWH7 488 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 ZNF229Q9UJW7 825 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 BCORQ6W2J9 1755 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 LAMTOR5O43504 91 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 TCEA3O75764 348 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 CAPN1P07384 714 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 HOXB6P17509 224 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC6A2P23975 617 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 OXTRP30559 389 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 STK19P49842 368 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 CCR8P51685 355 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 NEK2P51955 445 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 OTUD3Q5T2D3 398 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 FAAH2Q6GMR7 532 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 ADCK1Q86TW2 530 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 C3orf58Q8NDZ4 430 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 SMPDL3AQ92484 453 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 PEX13Q92968 403 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 APOL4Q9BPW4 351 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 GTPBP2Q9BX10 602 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 PAPPA2Q9BXP8 1791 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 A0A0J9YYE9 177 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 AP3D1O14617 1153 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 LILRB3O75022 631 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 GSNP06396 782 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 JAK1P23458 1154 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 NUP107P57740 925 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 FOXM1Q08050 763 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 UBAP2LQ14157 1087 aaKnown RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 HEPACAMQ14CZ8 416 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 QPCTQ16769 361 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 AMZ1Q400G9 498 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 MINDY4Q4G0A6 757 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 GPRC6AQ5T6X5 926 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 IL23RQ5VWK5 629 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 CHRDL2Q6WN34 429 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 ANKRD33Q7Z3H0 272 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 RCN3Q96D15 328 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 HOPXQ9BPY8 73 aaPredicted RBP9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 BRINP2Q9C0B6 783 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 SUSD2Q9UGT4 822 aa9.3□□□□□ -0.92
CLTCL1-208ENST00000615606 CPED1A4D0V7 1026 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 GRID2O43424 1007 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 B3GALT2O43825 422 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC28A2O43868 658 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 NRP2O60462 931 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 CNOT3O75175 753 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 NT5EP21589 574 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 STC1P52823 247 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC25A3Q00325 362 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 IL5RAQ01344 420 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC9B2Q86UD5 537 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 MICU2Q8IYU8 434 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 CPSF7Q8N684 471 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 BANPQ8N9N5 519 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 SLC43A3Q8NBI5 491 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 CLHC1Q8NHS4 586 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 HM13Q8TCT9 377 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 TRMT2BQ96GJ1 504 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 CLSTN3Q9BQT9 956 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 WDR55Q9H6Y2 383 aaPredicted RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 CDC14AQ9UNH5 594 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 CYP8B1Q9UNU6 501 aa9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 RUVBL1Q9Y265 456 aaKnown RBP9.29□□□□□ -0.92
CLTCL1-208ENST00000615606 POLR1DQ9Y2S0 133 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms