RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 SERPINA9Q86WD7 417 aa24.63■■□□□ 1.53
VEGFA-227ENST00000615393 C1orf54Q8WWF1 131 aa24.63■■□□□ 1.53
VEGFA-227ENST00000615393 KIAA1143Q96AT1 154 aaPredicted RBP24.63■■□□□ 1.53
VEGFA-227ENST00000615393 ARHGAP9Q9BRR9 750 aa24.63■■□□□ 1.53
VEGFA-227ENST00000615393 EFHD1Q9BUP0 239 aa24.63■■□□□ 1.53
VEGFA-227ENST00000615393 HEBP2Q9Y5Z4 205 aa24.63■■□□□ 1.53
VEGFA-227ENST00000615393 ATRXP46100 2492 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 E7EVH7 732 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 POLBP06746 335 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 CDKN1CP49918 316 aaPredicted RBP24.62■■□□□ 1.53
VEGFA-227ENST00000615393 KRT33BQ14525 404 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 DUS1LQ6P1R4 473 aaKnown RBP24.62■■□□□ 1.53
VEGFA-227ENST00000615393 ZNF662Q6ZS27 426 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 SPDYE1Q8NFV5 336 aaPredicted RBP24.62■■□□□ 1.53
VEGFA-227ENST00000615393 OR52K1Q8NGK4 314 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 UBXN4Q92575 508 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 EXTL1Q92935 676 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 OR6C1Q96RD1 312 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 SEMA4CQ9C0C4 833 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 KIR3DX1Q9H7L2 352 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 ETNK1Q9HBU6 452 aa24.62■■□□□ 1.53
VEGFA-227ENST00000615393 OR5K3A6NET4 321 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 MROH6A6NGR9 719 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 DLGAP3O95886 979 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 NELFEP18615 380 aaKnown RBP24.61■■□□□ 1.53
VEGFA-227ENST00000615393 NDUFS1P28331 727 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 SH3BP2P78314 561 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 ABHD18Q0P651 414 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 LAMB3Q13751 1172 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 MAP7Q14244 749 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 CAPRIN2Q6IMN6 1127 aaKnown RBP24.61■■□□□ 1.53
VEGFA-227ENST00000615393 ZNF449Q6P9G9 518 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 PPP1R21Q6ZMI0 780 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 OOSP2Q86WS3 158 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 ESX1Q8N693 406 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 CCDC89Q8N998 374 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 RMDN2Q96LZ7 410 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 CD180Q99467 661 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 SLC12A9Q9BXP2 914 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 GPN2Q9H9Y4 310 aaPredicted RBP24.61■■□□□ 1.53
VEGFA-227ENST00000615393 LZTFL1Q9NQ48 299 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 SEMA5BQ9P283 1151 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 SLC24A2Q9UI40 661 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 ATMQ13315 3056 aa24.61■■□□□ 1.53
VEGFA-227ENST00000615393 SUN1O94901 812 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 GSTM1P09488 218 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 PSMA3P25788 255 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 MSNP26038 577 aaKnown RBP24.6■■□□□ 1.53
VEGFA-227ENST00000615393 PPP1CAP62136 330 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 CYP4F2P78329 520 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 GSTM4Q03013 218 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 SNX1Q13596 522 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 LINC00303Q3SY05 128 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 DNTTIP2Q5QJE6 756 aaKnown RBP24.6■■□□□ 1.53
VEGFA-227ENST00000615393 ARMC6Q6NXE6 501 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 TIPARPQ7Z3E1 657 aaKnown RBP24.6■■□□□ 1.53
VEGFA-227ENST00000615393 RASGRP3Q8IV61 690 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 LILRA3Q8N6C8 439 aaPredicted RBP24.6■■□□□ 1.53
VEGFA-227ENST00000615393 ULBP3Q9BZM4 244 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 COG4Q9H9E3 785 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 HRASLS2Q9NWW9 162 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 PAK5Q9P286 719 aa24.6■■□□□ 1.53
VEGFA-227ENST00000615393 ZNF891A8MT65 544 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-227ENST00000615393 IFRD1O00458 451 aaPredicted RBP24.59■■□□□ 1.53
VEGFA-227ENST00000615393 NRDCO43847 1150 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 AP2A2O94973 939 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 PRSS56P0CW18 603 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 DBN1Q16643 649 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 ZNF605Q86T29 641 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 KMT5CQ86Y97 462 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 LRRC8AQ8IWT6 810 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 PIANPQ8IYJ0 282 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 SIDT2Q8NBJ9 832 aaKnown RBP24.59■■□□□ 1.53
VEGFA-227ENST00000615393 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.59■■□□□ 1.537e-6■■■■■ 27.5
VEGFA-227ENST00000615393 SLC45A3Q96JT2 553 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 SLC41A2Q96JW4 573 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 RAB6BQ9NRW1 208 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 SMARCAL1Q9NZC9 954 aa24.59■■□□□ 1.53
VEGFA-227ENST00000615393 IGHV5-51A0A0C4DH38 117 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 UBA6A0AVT1 1052 aaPredicted RBP24.58■■□□□ 1.53
VEGFA-227ENST00000615393 CCDC78A2IDD5 438 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 HEATR9A2RTY3 570 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 TLCD2A6NGC4 264 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 QSOX1O00391 747 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 FGF5P12034 268 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 NSG1P42857 185 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 ARL4DP49703 201 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 RPA4Q13156 261 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 SEMA5AQ13591 1074 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 ITIH4Q14624 930 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 CCNG2Q16589 344 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 TBR1Q16650 682 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 CCDC38Q502W7 563 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 PPP1R3BQ86XI6 285 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 MAIP1Q8WWC4 291 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 MAP3K3Q99759 626 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 PDE7BQ9NP56 450 aa24.58■■□□□ 1.53
VEGFA-227ENST00000615393 LOC101059948A0A1B0GTJ6 334 aa24.57■■□□□ 1.52
VEGFA-227ENST00000615393 OR6C74A6NCV1 312 aa24.57■■□□□ 1.52
VEGFA-227ENST00000615393 CD151P48509 253 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms