RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 NUP62P37198 522 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 OVGP1Q12889 678 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 LMAN2Q12907 356 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 CTBP1Q13363 440 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZNF280BQ86YH2 543 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 CREG2Q8IUH2 290 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 EPHX4Q8IUS5 362 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 GLB1L3Q8NCI6 653 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 XPR1Q9UBH6 696 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 MAGEL2Q9UJ55 1249 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRR23D1E9PI22 279 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 XKRYO14609 159 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 PDPK1O15530 556 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 SLC22A3O75751 556 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 SERPINI2O75830 405 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 SEMA4FO95754 770 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ECDO95905 644 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 HEXBP07686 556 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 GIMD1P0DJR0 217 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRR23D2P0DMB1 279 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ITPKAP23677 461 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ALDH4A1P30038 563 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 TALDO1P37837 337 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 PBX1P40424 430 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 PLIN5Q00G26 463 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 Q6ZVU0 165 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 FBXO15Q8NCQ5 510 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZNF717Q9BY31 904 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 MAGEE1Q9HCI5 957 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 COQ6Q9Y2Z9 468 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 AK5Q9Y6K8 562 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 MYH13Q9UKX3 1938 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 MPIP34949 423 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 LCP2Q13094 533 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 DYNC1I2Q13409 638 aaKnown RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 NFATC2Q13469 925 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ANKRD33Q7Z3H0 272 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZNF276Q8N554 614 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRELID2Q8N945 189 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 AENQ8WTP8 325 aaKnown RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ATOH1Q92858 354 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 CLCA3PQ9Y6N3 262 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRAMEF26H0Y7S4 382 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 HAS3O00219 553 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 FFAR3O14843 346 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 KHNYNO15037 678 aaKnown RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 GPR42O15529 346 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 SCN2BO60939 215 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 FAM20BO75063 409 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 RPS24P62847 133 aaKnown RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 LCN1P1Q5VSP4 162 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 HDDC2Q7Z4H3 204 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 OAFQ86UD1 273 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 TRPV1Q8NER1 839 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 PREBQ9HCU5 417 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 EXOSC4Q9NPD3 245 aaKnown RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 TJP1Q07157 1748 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 COL18A1P39060 1754 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 A6NCN8 305 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 WASHC1A8K0Z3 465 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 WASH3PC4AMC7 463 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 HDAC3O15379 428 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 GRID2O43424 1007 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 MT-CYBP00156 380 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZSCAN5DPP0CG00 497 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 SLC26A3P40879 764 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 RPS15P62841 145 aaKnown RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 C2orf80Q0P641 193 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 GALNT2Q10471 571 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 RFX4Q33E94 735 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 PDCD4Q53EL6 469 aaKnown RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZCCHC12Q6PEW1 402 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 WASH2PQ6VEQ5 465 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 NUP54Q7Z3B4 507 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 DENND6AQ8IWF6 608 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 UBALD2Q8IYN6 164 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZNF516Q92618 1163 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ADAM7Q9H2U9 754 aa9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZNF282Q9UDV7 671 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 DNMT3AQ9Y6K1 912 aaPredicted RBP9.6□□□□□ -0.87
TNFRSF9-204ENST00000615230 H3BN98 237 aa9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 TXNL4AP83876 142 aaKnown RBP9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 CST6Q15828 149 aa9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 CPSF6Q16630 551 aaKnown RBP eCLIP9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 KLHL24Q6TFL4 600 aa9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 MRPL43Q8N983 215 aaKnown RBP9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 FIBINQ8TAL6 211 aa9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 PTCD3Q96EY7 689 aaKnown RBP9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 OR52E6Q96RD3 313 aa9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 MCMBPQ9BTE3 642 aa9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 CDADC1Q9BWV3 514 aa9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 RHOBTB2Q9BYZ6 727 aa9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 CLN6Q9NWW5 311 aa9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 PPIEQ9UNP9 301 aaKnown RBP9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 HEMK1Q9Y5R4 338 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 SMIM31A0A1B0GVY4 71 aa9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 MMP20O60882 483 aa9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 ITGBL1O95965 494 aaPredicted RBP9.59□□□□□ -0.87
TNFRSF9-204ENST00000615230 CHRNB2P17787 502 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms