RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 AP2A2O94973 939 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 SLC35G4P0C7Q5 338 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 THRAP10827 490 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 MTHFD1P11586 935 aaKnown RBP16.36■□□□□ 0.21
CBWD3-211ENST00000615061 ITGB6P18564 788 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 LIMK2P53671 638 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 EPHA4P54764 986 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 BRD3Q15059 726 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 SNAP47Q5SQN1 464 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 IZUMO3Q5VZ72 239 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 CERS6Q6ZMG9 384 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 AVL9Q8NBF6 648 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 OR4D9Q8NGE8 314 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 RSC1A1Q92681 617 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 C16orf45Q96MC5 204 aaPredicted RBP16.36■□□□□ 0.21
CBWD3-211ENST00000615061 KRT12Q99456 494 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 STRADBQ9C0K7 418 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 ASCL3Q9NQ33 180 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 KLHL3Q9UH77 587 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 ANAPC5Q9UJX4 755 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 LOXL2Q9Y4K0 774 aa16.36■□□□□ 0.21
CBWD3-211ENST00000615061 SDR42E2A6NKP2 422 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 IQCF5A8MTL0 148 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 CCDC188H7C350 402 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 PLD2O14939 933 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 BANF1O75531 89 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 F7P08709 466 aaPredicted RBP16.35■□□□□ 0.21
CBWD3-211ENST00000615061 ARCN1P48444 511 aaKnown RBP16.35■□□□□ 0.21
CBWD3-211ENST00000615061 GFERP55789 205 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 LYPLAL1Q5VWZ2 237 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 TMEM71Q6P5X7 295 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 FBXO39Q8N4B4 442 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 LKAAEAR1Q8TD35 194 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 ZNF669Q96BR6 464 aaPredicted RBP16.35■□□□□ 0.21
CBWD3-211ENST00000615061 SIGLEC10Q96LC7 697 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 PWWP2AQ96N64 755 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 SLC46A1Q96NT5 459 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 OR52A5Q9H2C5 316 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 VPS37BQ9H9H4 285 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 UCK1Q9HA47 277 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.35■□□□□ 0.21
CBWD3-211ENST00000615061 SAMD15Q9P1V8 674 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 RNF14Q9UBS8 474 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 PISDQ9UG56 409 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 PCDHGA8Q9Y5G5 932 aa16.35■□□□□ 0.21
CBWD3-211ENST00000615061 KLHL33A6NCF5 533 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 A8MU76 341 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 TMX2-CTNND1H3BSU7 103 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 UBXN7O94888 489 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 TNFSF15O95150 251 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 ETV5P41161 510 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 CLPPQ16740 277 aaPredicted RBP16.34■□□□□ 0.21
CBWD3-211ENST00000615061 TBC1D25Q3MII6 688 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 ANKRD20A4Q4UJ75 823 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 MSS51Q4VC12 460 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 CAPRIN2Q6IMN6 1127 aaKnown RBP16.34■□□□□ 0.21
CBWD3-211ENST00000615061 OTUD6BQ8N6M0 293 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 ELMO1Q92556 727 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 TTC1Q99614 292 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 NRTNQ99748 197 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 TRIM31Q9BZY9 425 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 MAD1L1Q9Y6D9 718 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 RPS6KL1Q9Y6S9 549 aa16.34■□□□□ 0.21
CBWD3-211ENST00000615061 ZCWPW2A0A1B0GU75 182 aa16.33■□□□□ 0.21
CBWD3-211ENST00000615061 FAM237BA0A1B0GVD1 139 aa16.33■□□□□ 0.21
CBWD3-211ENST00000615061 DXOO77932 396 aaKnown RBP16.33■□□□□ 0.21
CBWD3-211ENST00000615061 OR56A5P0C7T3 313 aa16.33■□□□□ 0.21
CBWD3-211ENST00000615061 CCL4P13236 92 aa16.33■□□□□ 0.21
CBWD3-211ENST00000615061 CSE1LP55060 971 aaKnown RBP16.33■□□□□ 0.21
CBWD3-211ENST00000615061 PPP1CAP62136 330 aa16.33■□□□□ 0.21
CBWD3-211ENST00000615061 C2orf54Q08AI8 447 aa16.33■□□□□ 0.21
CBWD3-211ENST00000615061 BOP1Q14137 746 aaKnown RBP16.33■□□□□ 0.21
CBWD3-211ENST00000615061 DHX34Q14147 1143 aaKnown RBP16.33■□□□□ 0.21
CBWD3-211ENST00000615061 AARS2Q5JTZ9 985 aaKnown RBP16.33■□□□□ 0.21
CBWD3-211ENST00000615061 KIAA0930Q6ICG6 404 aaPredicted RBP16.33■□□□□ 0.21
CBWD3-211ENST00000615061 WDR74Q6RFH5 385 aaPredicted RBP16.33■□□□□ 0.21
CBWD3-211ENST00000615061 KRT222Q8N1A0 295 aa16.33■□□□□ 0.21
CBWD3-211ENST00000615061 SPATA4Q8NEY3 305 aa16.33■□□□□ 0.21
CBWD3-211ENST00000615061 FTH1P02794 183 aa16.33■□□□□ 0.2
CBWD3-211ENST00000615061 AMD1P17707 334 aa16.33■□□□□ 0.2
CBWD3-211ENST00000615061 TTPAP49638 278 aa16.33■□□□□ 0.2
CBWD3-211ENST00000615061 DHX9Q08211 1270 aaKnown RBP16.33■□□□□ 0.2
CBWD3-211ENST00000615061 EIF3IQ13347 325 aaKnown RBP16.33■□□□□ 0.2
CBWD3-211ENST00000615061 TMEM135Q86UB9 458 aa16.33■□□□□ 0.2
CBWD3-211ENST00000615061 RBM12BQ8IXT5 1001 aaKnown RBP16.33■□□□□ 0.2
CBWD3-211ENST00000615061 LSMEM2Q8N112 164 aa16.33■□□□□ 0.2
CBWD3-211ENST00000615061 FGF11Q92914 225 aa16.33■□□□□ 0.2
CBWD3-211ENST00000615061 RUNDC3BQ96NL0 473 aa16.33■□□□□ 0.2
CBWD3-211ENST00000615061 DCBLD2Q96PD2 775 aa16.33■□□□□ 0.2
CBWD3-211ENST00000615061 CMKLR1Q99788 373 aa16.33■□□□□ 0.2
CBWD3-211ENST00000615061 PDP2Q9P2J9 529 aa16.33■□□□□ 0.2
CBWD3-211ENST00000615061 SPTBP11277 2137 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 SDK2Q58EX2 2172 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 QSOX1O00391 747 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 PRMT5O14744 637 aaPredicted RBP16.32■□□□□ 0.2
CBWD3-211ENST00000615061 TP73O15350 636 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 JMJD7P0C870 316 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 RBMS1P29558 406 aaKnown RBP16.32■□□□□ 0.2
CBWD3-211ENST00000615061 CCR7P32248 378 aa16.32■□□□□ 0.2
CBWD3-211ENST00000615061 CAPZBP47756 277 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms