RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 PDHXO00330 501 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 SERPINF2P08697 491 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 S100A3P33764 101 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 CLCNKBP51801 687 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 DNAJB13P59910 316 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 BEX3Q00994 111 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 RAPSNQ13702 412 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 BTG3Q14201 252 aaPredicted RBP11.62□□□□□ -0.55
CDH5-208ENST00000614547 DEPDC1Q5TB30 811 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 PELI3Q8N2H9 469 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 MRGPRX2Q96LB1 330 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 GPR78Q96P69 363 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 ATP13A3Q9H7F0 1226 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 KAT8Q9H7Z6 458 aaKnown RBP11.62□□□□□ -0.55
CDH5-208ENST00000614547 NEK6Q9HC98 313 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 ZNF221Q9UK13 617 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 PCDHGA11Q9Y5H2 935 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 KRT87PA6NCN2 255 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 SYNDIG1LA6NDD5 238 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 CRHBPP24387 322 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 CCNCP24863 283 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 DNAJB2P25686 324 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 RAB15P59190 212 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 SEMG2Q02383 582 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 PYCR3Q53H96 274 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 SPANXN4Q5MJ08 99 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 SMYD5Q6GMV2 418 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 CYP20A1Q6UW02 462 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 PLEKHG7Q6ZR37 379 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 ZDHHC21Q8IVQ6 265 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 MINDY1Q8N5J2 469 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 TTYH2Q9BSA4 534 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 DNAJB9Q9UBS3 223 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 IKZF3Q9UKT9 509 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 USP3Q9Y6I4 520 aa11.62□□□□□ -0.55
CDH5-208ENST00000614547 DNMT3AQ9Y6K1 912 aaPredicted RBP11.62□□□□□ -0.55
CDH5-208ENST00000614547 IGKV6D-21A0A0A0MT36 114 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 ARHGEF9O43307 516 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 TNFRSF21O75509 655 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 CAPN15O75808 1086 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 HTRA3P83110 453 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 GHRHRQ02643 423 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 RUNX1T1Q06455 604 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 TOP3AQ13472 1001 aaPredicted RBP11.61□□□□□ -0.55
CDH5-208ENST00000614547 RBM48Q5RL73 367 aaKnown RBP11.61□□□□□ -0.55
CDH5-208ENST00000614547 SYVN1Q86TM6 617 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 TAGAPQ8N103 731 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 TTC29Q8NA56 475 aaPredicted RBP11.61□□□□□ -0.55
CDH5-208ENST00000614547 ATL1Q8WXF7 558 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 LGALS12Q96DT0 336 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 ASB2Q96Q27 587 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 SEPT5Q99719 369 aaPredicted RBP11.61□□□□□ -0.55
CDH5-208ENST00000614547 RHNO1Q9BSD3 238 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 CRTAC1Q9NQ79 661 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 RPRD1BQ9NQG5 326 aaKnown RBP11.61□□□□□ -0.55
CDH5-208ENST00000614547 PAK1IP1Q9NWT1 392 aaPredicted RBP11.61□□□□□ -0.55
CDH5-208ENST00000614547 ADPRHL2Q9NX46 363 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 GMIPQ9P107 970 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 DUSP12Q9UNI6 340 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 IPPQ9Y573 584 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 C2orf81A6NN90 581 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 E9PAM4 449 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 TBX4P57082 545 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 PKDCCQ504Y2 493 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 SIRPB2Q5JXA9 342 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 C6orf136Q5SQH8 315 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 DENND5AQ6IQ26 1287 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 C2orf69Q8N8R5 385 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 C7orf57Q8NEG2 295 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 OR6K2Q8NGY2 324 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 SLC22A17Q8WUG5 538 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 UBE2FQ969M7 185 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 REEP1Q9H902 201 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 ABCB9Q9NP78 766 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 ERVK-11Q9UQG0 969 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 KLHL20Q9Y2M5 609 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 CHRNA1P02708 482 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 HSD17B1P14061 328 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 EEFSECP57772 596 aaKnown RBP11.61□□□□□ -0.55
CDH5-208ENST00000614547 CCBE1Q6UXH8 406 aaPredicted RBP11.61□□□□□ -0.55
CDH5-208ENST00000614547 NEK10Q6ZWH5 1172 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 TRIM48Q8IWZ4 208 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 KRTCAP2Q8N6L1 136 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 MTERF3Q96E29 417 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 CSF3RQ99062 836 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 CINPQ9BW66 212 aaPredicted RBP11.61□□□□□ -0.55
CDH5-208ENST00000614547 IPPKQ9H8X2 491 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 WBP11Q9Y2W2 641 aaKnown RBP11.61□□□□□ -0.55
CDH5-208ENST00000614547 PCDHGC4Q9Y5F7 938 aa11.61□□□□□ -0.55
CDH5-208ENST00000614547 NRCAMQ92823 1304 aa11.6□□□□□ -0.55
CDH5-208ENST00000614547 VPS4BO75351 444 aa11.6□□□□□ -0.55
CDH5-208ENST00000614547 ARNTP27540 789 aa11.6□□□□□ -0.55
CDH5-208ENST00000614547 SOX6P35712 828 aa11.6□□□□□ -0.55
CDH5-208ENST00000614547 MAGEA12P43365 314 aa11.6□□□□□ -0.55
CDH5-208ENST00000614547 ZNF280AP59817 542 aaPredicted RBP11.6□□□□□ -0.55
CDH5-208ENST00000614547 SPATA19Q7Z5L4 167 aa11.6□□□□□ -0.55
CDH5-208ENST00000614547 DEPDC4Q8N2C3 294 aa11.6□□□□□ -0.55
CDH5-208ENST00000614547 TMEM199Q8N511 208 aa11.6□□□□□ -0.55
CDH5-208ENST00000614547 CAMKK1Q8N5S9 505 aa11.6□□□□□ -0.55
CDH5-208ENST00000614547 CHDHQ8NE62 594 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms