RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 LRRC8EQ6NSJ5 796 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 PAQR3Q6TCH7 311 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 PIM3Q86V86 326 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 GKN2Q86XP6 184 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 CEP97Q8IW35 865 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 CD200R1Q8TD46 325 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 LMX1AQ8TE12 382 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 ISL2Q96A47 359 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 LRRC61Q9BV99 259 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 DPEP2Q9H4A9 486 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 SMOC1Q9H4F8 434 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 FSCN3Q9NQT6 498 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 SNX15Q9NRS6 342 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 DOLKQ9UPQ8 538 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 CSNK1G3Q9Y6M4 447 aa14.42□□□□□ -0.1
CD48-203ENST00000613788 NEMP2A6NFY4 417 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 PROB1E7EW31 1015 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 MAP2K7O14733 419 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 TPP1O14773 563 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 PIAS2O75928 621 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 SLCO2B1O94956 709 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 ALDOAP04075 364 aaKnown RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 ENO3P13929 434 aaPredicted RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 ENGP17813 658 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 AK4P27144 223 aaPredicted RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 ATP5DP30049 168 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 SLC26A3P40879 764 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 C1orf61Q13536 156 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 TAF1BQ53T94 588 aaPredicted RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 SLC30A9Q6PML9 568 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 NAPRTQ6XQN6 538 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 CMC1Q7Z7K0 106 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 NRROSQ86YC3 692 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 CYP4X1Q8N118 509 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 NKAPQ8N5F7 415 aaKnown RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 CCL4L1Q8NHW4 92 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 ACMSDQ8TDX5 336 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 GLMNQ92990 594 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 CABS1Q96KC9 395 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 SLC30A3Q99726 388 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 GTPBP2Q9BX10 602 aaKnown RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 STMN4Q9H169 189 aaPredicted RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 CENPHQ9H3R5 247 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 ACOT9Q9Y305 439 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 ST14Q9Y5Y6 855 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 CACNA1HO95180 2353 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 A0A087X1B8 175 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 A0A096LPK6 155 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 PRR19A6NJB7 356 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 PHGDHO43175 533 aaKnown RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 ATP8B1O43520 1251 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 C2P06681 752 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 BNIP3Q12983 259 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 GBX1Q14549 363 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 ZNF460Q14592 562 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 TCEA2Q15560 299 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 LVRNQ6Q4G3 990 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 WASH2PQ6VEQ5 465 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 FAM83HQ6ZRV2 1179 aaPredicted RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 TBC1D1Q86TI0 1168 aaPredicted RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 CPNE9Q8IYJ1 553 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 ZNF548Q8NEK5 533 aaPredicted RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 GIMAP7Q8NHV1 300 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 MZB1Q8WU39 189 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 PGM2Q96G03 612 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 WASH6PQ9NQA3 447 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 TAAR2Q9P1P5 351 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.41□□□□□ -0.1
CD48-203ENST00000613788 CDYLQ9Y232 598 aa14.41□□□□□ -0.1
CD48-203ENST00000613788 USP34Q70CQ2 3546 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 PDZK1P1A8MUH7 402 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 LMO7DNF2Z398 122 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 IFRD1O00458 451 aaPredicted RBP14.4□□□□□ -0.1
CD48-203ENST00000613788 YY2O15391 372 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 OPA1O60313 960 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 FOXD2O60548 495 aaPredicted RBP14.4□□□□□ -0.1
CD48-203ENST00000613788 SNX2O60749 519 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 SDC3O75056 442 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 RFPL1O75677 317 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 ANXA6P08133 673 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 SLC35G4P0C7Q5 338 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 ZNF37AP17032 561 aaPredicted RBP14.4□□□□□ -0.1
CD48-203ENST00000613788 EPHA8P29322 1005 aaPredicted RBP14.4□□□□□ -0.1
CD48-203ENST00000613788 HALP42357 657 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 MAGEA12P43365 314 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 PREPP48147 710 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 CCT8P50990 548 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 SPEM2Q0P670 501 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 SHBQ15464 509 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 CSRP2Q16527 193 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 ACSBG2Q5FVE4 666 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 AGAP9Q5VTM2 703 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 TCEAL6Q6IPX3 200 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 ABRAXAS1Q6UWZ7 409 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 NEK10Q6ZWH5 1172 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 SLC22A15Q8IZD6 547 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 LILRA3Q8N6C8 439 aaPredicted RBP14.4□□□□□ -0.1
CD48-203ENST00000613788 GOLGA6L1Q8N7Z2 621 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 FAM46DQ8NEK8 389 aa14.4□□□□□ -0.1
CD48-203ENST00000613788 EEF1AKMT1Q8WVE0 214 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms