RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 EMX2Q04743 252 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 LRRC74AQ0VAA2 488 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 KLHDC10Q6PID8 442 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 SLC2A7Q6PXP3 512 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 CCDC81Q6ZN84 652 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 SPNS2Q8IVW8 549 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 PGBD5Q8N414 524 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 CREBZFQ9NS37 354 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 A0A1W2PQ67 120 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 C2orf78A6NCI8 922 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 OR2AG2A6NM03 316 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 PITPNM1O00562 1244 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 ADAM12O43184 909 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 DENRO43583 198 aaKnown RBP6.28□□□□□ -1.4
SNX13-213ENST00000611725 ASLP04424 464 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 TFAP2AP05549 437 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 HSD17B1P14061 328 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 PCSK2P16519 638 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 CLK1P49759 484 aaKnown RBP6.28□□□□□ -1.4
SNX13-213ENST00000611725 PRMT2P55345 433 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 NFATC2Q13469 925 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 LRP8Q14114 963 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 SPANXN4Q5MJ08 99 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 ZCCHC8Q6NZY4 707 aaKnown RBP6.28□□□□□ -1.4
SNX13-213ENST00000611725 TRMT11Q7Z4G4 463 aaKnown RBP6.28□□□□□ -1.4
SNX13-213ENST00000611725 PROSER1Q86XN7 944 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 ZNF510Q9Y2H8 683 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 MYH4Q9Y623 1939 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 MYOCOSA0A1B0GUC4 107 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 H0YJX3 145 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 XYLBO75191 536 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 KLKB1P03952 638 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 HNRNPCP07910 306 aaKnown RBP eCLIP6.28□□□□□ -1.4
SNX13-213ENST00000611725 MTHFD2P13995 350 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 HOXB6P17509 224 aaKnown RBP6.28□□□□□ -1.4
SNX13-213ENST00000611725 POLR2EP19388 210 aaKnown RBP6.28□□□□□ -1.4
SNX13-213ENST00000611725 PRDX3P30048 256 aaKnown RBP6.28□□□□□ -1.4
SNX13-213ENST00000611725 CYP4F8P98187 520 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 MGAT3Q09327 533 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 CHRNA6Q15825 494 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 NANOGP8Q6NSW7 305 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 DET1Q7L5Y6 550 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 THAP5Q7Z6K1 395 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 GALNT7Q86SF2 657 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 TRAPPC5Q8IUR0 188 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 REM2Q8IYK8 340 aaPredicted RBP6.28□□□□□ -1.4
SNX13-213ENST00000611725 LILRA2Q8N149 483 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 DDHD1Q8NEL9 900 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 HM13Q8TCT9 377 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 MTFMTQ96DP5 389 aaKnown RBP6.28□□□□□ -1.4
SNX13-213ENST00000611725 RPF2Q9H7B2 306 aaKnown RBP6.28□□□□□ -1.4
SNX13-213ENST00000611725 NANOGQ9H9S0 305 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 MAGEE1Q9HCI5 957 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 INTS7Q9NVH2 962 aaKnown RBP6.28□□□□□ -1.4
SNX13-213ENST00000611725 U3KQV3 271 aa6.28□□□□□ -1.4
SNX13-213ENST00000611725 DLEC1Q9Y238 1755 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 IFRD1O00458 451 aaPredicted RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 SLC9A3R1O14745 358 aaPredicted RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 INPPL1O15357 1258 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ERN1O75460 977 aaKnown RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 EPN2O95208 641 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 IFNA8P32881 189 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 MAPK10P53779 464 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 CREB5Q02930 508 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 MBTPS1Q14703 1052 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 BROXQ5VW32 411 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 PRR23BQ6ZRT6 265 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 EP400NLQ6ZTU2 488 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 TPRG1Q6ZUI0 275 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 RNF168Q8IYW5 571 aaPredicted RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 KREMEN2Q8NCW0 462 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 SUV39H2Q9H5I1 410 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ADGRE2Q9UHX3 823 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 PRSS51A0A1B0GVH4 220 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 MROH6A6NGR9 719 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 AOC2O75106 756 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 SERPINB10P48595 397 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ZNF140P52738 457 aaPredicted RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 AP1S2P56377 157 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 PWP1Q13610 501 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 PHKG1Q16816 387 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 PTCHD3Q3KNS1 767 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 XKR6Q5GH73 641 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ZDHHC20Q5W0Z9 365 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 FBXL19Q6PCT2 694 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 CD300LGQ6UXG3 332 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 ANKRD46Q86W74 232 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 GOLM1Q8NBJ4 401 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 STARD8Q92502 1023 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 RORBQ92753 470 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 NSMCE3Q96MG7 304 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 B4GALT6Q9UBX8 382 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 RIMS3Q9UJD0 308 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 PTBP2Q9UKA9 531 aaKnown RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 SLC13A4Q9UKG4 626 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 CNOT11Q9UKZ1 510 aaKnown RBP6.27□□□□□ -1.41
SNX13-213ENST00000611725 DYRK1BQ9Y463 629 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 A0A1W2PRU2 124 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 H3BSA7 217 aa6.27□□□□□ -1.41
SNX13-213ENST00000611725 TRBC1P01850 177 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms