RNA–Protein interactions for RNA: ENST00000607520.1

SCARNA15-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 4,325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-201ENST00000607520 CCDC177Q9NQR7 707 aaPredicted RBP5.09□□□□□ -1.6
SCARNA15-201ENST00000607520 TMEM30AQ9NV96 361 aa5.09□□□□□ -1.6
SCARNA15-201ENST00000607520 LRIT1Q9P2V4 623 aa5.09□□□□□ -1.6
SCARNA15-201ENST00000607520 EBF1Q9UH73 591 aa5.09□□□□□ -1.6
SCARNA15-201ENST00000607520 SPTA1P02549 2419 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 MUC6Q6W4X9 2439 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 C2orf74A8MZ97 194 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 TRIM49D1C9J1S8 452 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CLDN4O14493 209 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CFLARO15519 480 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 AP1G1O43747 822 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 SHOX2O60902 331 aaPredicted RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 HAUS5O94927 633 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 ANP32DO95626 131 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 GOT2P00505 430 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 ETS1P14921 441 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CCNG1P51959 295 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 ARF5P84085 180 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 HLA-BQ31612 363 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 MINDY4Q4G0A6 757 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 C9orf64Q5T6V5 341 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 STPG1Q5TH74 334 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 ZCCHC8Q6NZY4 707 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 PNCKQ6P2M8 343 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 KIAA0408Q6ZU52 694 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 SLC26A11Q86WA9 606 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 NUDCD3Q8IVD9 361 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 TCAIMQ8N3R3 496 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 VPS37AQ8NEZ2 397 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 OR4E2Q8NGC2 313 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 RNF217Q8TC41 542 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 WBP2Q969T9 261 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CENPTQ96BT3 561 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 RSPRY1Q96DX4 576 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 IMP4Q96G21 291 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 TGM7Q96PF1 710 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 RIC8BQ9NVN3 520 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CORO1CQ9ULV4 474 aaPredicted RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 TMCO1Q9UM00 188 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 PRKAB1Q9Y478 270 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 IGHV1OR15-9A0A0B4J2B8 117 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 IGLV3-27P01718 113 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 KRT4P19013 534 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 ZNF252P-AS1Q0IIN9 211 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 TAF11Q15544 211 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 TRIP6Q15654 476 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 AP5B1Q2VPB7 878 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 COLEC12Q5KU26 742 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CXorf57Q6NSI4 855 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 LVRNQ6Q4G3 990 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 IQCHQ86VS3 1027 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CRIPAKQ8N1N5 446 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 OR13H1Q8NG92 308 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 OR13C4Q8NGS5 318 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 SNIP1Q8TAD8 396 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 DTD2Q96FN9 168 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 KLF6Q99612 283 aaPredicted RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 ASPSCR1Q9BZE9 553 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 EIF2B3Q9NR50 452 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 TRNAU1APQ9NX07 287 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 SYBUQ9NX95 663 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 TEKT2Q9UIF3 430 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 RABGEF1Q9UJ41 708 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 PPM1HQ9ULR3 514 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 VWA7Q9Y334 891 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 MTF2Q9Y483 593 aaPredicted RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 ARL5AQ9Y689 179 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 FAM237BA0A1B0GVD1 139 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 TNFRSF10CO14798 259 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 LRP3O75074 770 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 ZWINTO95229 277 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CD63P08962 238 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 HPGDP15428 266 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 GPC1P35052 558 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CASRP41180 1078 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 AP2B1P63010 937 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 SF3A2Q15428 464 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 KIF19Q2TAC6 998 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 MMEL1Q495T6 779 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 MANEAQ5SRI9 462 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CYP20A1Q6UW02 462 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 TMEM92Q6UXU6 159 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 YTHDF3Q7Z739 585 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 FAM9CQ8IZT9 166 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 NXPE1Q8N323 547 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 SMPDL3AQ92484 453 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 ART4Q93070 314 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 ERP27Q96DN0 273 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 LINGO1Q96FE5 620 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 PLEKHG4BQ96PX9 1271 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 GABRG3Q99928 467 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 PRO3102Q9H379 93 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CAPN10Q9HC96 672 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 INTS10Q9NVR2 710 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 NINJ2Q9NZG7 142 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 SNX7Q9UNH6 387 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 CA5BQ9Y2D0 317 aa5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 RBBP6Q7Z6E9 1792 aaKnown RBP5.08□□□□□ -1.6
SCARNA15-201ENST00000607520 LRRC37A2A6NM11 1700 aa5.07□□□□□ -1.6
SCARNA15-201ENST00000607520 IGLV3-10A0A075B6K4 115 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms