RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 C12orf66Q96MD2 445 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 PANX2Q96RD6 677 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 CD180Q99467 661 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 FAM118BQ9BPY3 351 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 C19orf43Q9BQ61 176 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 AKIRIN1Q9H9L7 192 aaPredicted RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 ARNT2Q9HBZ2 717 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 LHX9Q9NQ69 397 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 ASH1LQ9NR48 2969 aaKnown RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 IMP3Q9NV31 184 aaKnown RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 SLC24A2Q9UI40 661 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 FKBPLQ9UIM3 349 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 LNPEPQ9UIQ6 1025 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 KCND3Q9UK17 655 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 RARRES3Q9UL19 164 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 REXO2Q9Y3B8 237 aaKnown RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 COLEC10Q9Y6Z7 277 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 C17orf113A0A1B0GUU1 675 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 PIPSLA2A3N6 862 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 CCDC66A2RUB6 948 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 OR6C74A6NCV1 312 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 TLCD2A6NGC4 264 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 ARHGAP6O43182 974 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 LDB2O43679 373 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 CREG1O75629 220 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 STK10O94804 968 aaKnown RBP7.43□□□□□ -1.22
CUX1-219ENST00000606749 TJP3O95049 919 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 NTRK1P04629 796 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 EBLN1P0CF75 366 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 RALBP11234 206 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 ATP1B2P14415 290 aaPredicted RBP7.43□□□□□ -1.22
CUX1-219ENST00000606749 CASRP41180 1078 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 CETN2P41208 172 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 ARL4DP49703 201 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 CDKN1CP49918 316 aaPredicted RBP7.43□□□□□ -1.22
CUX1-219ENST00000606749 KPNA2P52292 529 aaKnown RBP7.43□□□□□ -1.22
CUX1-219ENST00000606749 ZNF140P52738 457 aaPredicted RBP7.43□□□□□ -1.22
CUX1-219ENST00000606749 HSD11B2P80365 405 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 TMPRSS15P98073 1019 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 PDE1BQ01064 536 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 ACY1Q03154 408 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 SEPT6Q14141 434 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 SPARCL1Q14515 664 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 GSE1Q14687 1217 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 DNTTIP2Q5QJE6 756 aaKnown RBP7.43□□□□□ -1.22
CUX1-219ENST00000606749 DUS1LQ6P1R4 473 aaKnown RBP7.43□□□□□ -1.22
CUX1-219ENST00000606749 SNX20Q7Z614 316 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 TMEM135Q86UB9 458 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 OOSP2Q86WS3 158 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 TMTC1Q8IUR5 882 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 KLHDC8BQ8IXV7 354 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 NXPE1Q8N323 547 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 LILRA3Q8N6C8 439 aaPredicted RBP7.43□□□□□ -1.22
CUX1-219ENST00000606749 LRRC57Q8N9N7 239 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 OR4E2Q8NGC2 313 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 CT55Q8WUE5 264 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 ULK4Q96C45 1275 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 DCUN1D1Q96GG9 259 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 SPATA13Q96N96 652 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 TBL1YQ9BQ87 522 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 CCM2Q9BSQ5 444 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 LACRTQ9GZZ8 138 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 EPN3Q9H201 632 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 FAM96AQ9H5X1 160 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 KIR3DX1Q9H7L2 352 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 FGF21Q9NSA1 209 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 KCND1Q9NSA2 647 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 FAM8A1Q9UBU6 413 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 FEZ2Q9UHY8 353 aaPredicted RBP7.43□□□□□ -1.22
CUX1-219ENST00000606749 CRLS1Q9UJA2 301 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 ANAPC2Q9UJX6 822 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 POLHQ9Y253 713 aa7.43□□□□□ -1.22
CUX1-219ENST00000606749 COL12A1Q99715 3063 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 IGLV3-16A0A075B6K0 115 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 MACROD2A1Z1Q3 448 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 CDC14CA4D256 554 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 GRID2IPA4D2P6 1211 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 C21orf140B9A014 251 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 K7EM74 188 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 CCL22O00626 93 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 ZBTB11O95625 1053 aaPredicted RBP7.42□□□□□ -1.22
CUX1-219ENST00000606749 SLC35G4P0C7Q5 338 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 TPH1P17752 444 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 POLR2CP19387 275 aaPredicted RBP7.42□□□□□ -1.22
CUX1-219ENST00000606749 ITGALP20701 1170 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 NDUFS1P28331 727 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 PTPN4P29074 926 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 HADHAP40939 763 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 ARCN1P48444 511 aaKnown RBP7.42□□□□□ -1.22
CUX1-219ENST00000606749 PRLHRP49683 370 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 ZNF75DP51815 510 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 TUBB4BP68371 445 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 DNASE1L3Q13609 305 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 TUBB2AQ13885 445 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 KRT33BQ14525 404 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 IGFBP7Q16270 282 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 PARP6Q2NL67 630 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 GPR33Q49SQ1 333 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 ZNF658BQ4V348 819 aaPredicted RBP7.42□□□□□ -1.22
CUX1-219ENST00000606749 LACTB2Q53H82 288 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms