RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 KCTD15Q96SI1 283 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-217ENST00000602723 TBX1O43435 398 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 AP2A1O95782 977 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 AP2S1P53680 142 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-217ENST00000602723 MC1RQ01726 317 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 KHDC1Q4VXA5 237 aaKnown RBP9.49□□□□□ -0.89
CSMD1-217ENST00000602723 DPF3Q92784 378 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 TUBGCP5Q96RT8 1024 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 P2RX7Q99572 595 aaKnown RBP9.49□□□□□ -0.89
CSMD1-217ENST00000602723 BRINP2Q9C0B6 783 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 NEUROD4Q9HD90 331 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 TESMINQ9Y4I5 508 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 IQCF5A8MTL0 148 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 SLC22A1O15245 554 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 HERC3Q15034 1050 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 KLHL35Q6PF15 583 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 OTOP3Q7RTS5 596 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 TRIM74Q86UV6 250 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 TRIM73Q86UV7 250 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 PRRG4Q9BZD6 226 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 AASSQ9UDR5 926 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 FAM237AA0A1B0GTK4 181 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 C5orf51A6NDU8 294 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 TOR1BO14657 336 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 ASLP04424 464 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 RPL6Q02878 288 aaKnown RBP9.49□□□□□ -0.89
CSMD1-217ENST00000602723 FASTKD3Q14CZ7 662 aaKnown RBP9.49□□□□□ -0.89
CSMD1-217ENST00000602723 ZNF311Q5JNZ3 666 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 UBAP2Q5T6F2 1119 aaKnown RBP9.49□□□□□ -0.89
CSMD1-217ENST00000602723 OGFRL1Q5TC84 451 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-217ENST00000602723 ATP6V1C2Q8NEY4 427 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 ACOT12Q8WYK0 555 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 LPGAT1Q92604 370 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 LPPQ93052 612 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 LGR4Q9BXB1 951 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 TMLHEQ9NVH6 421 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 PRMT3O60678 531 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 CFAP52Q8N1V2 620 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 DCBLD1Q8N8Z6 715 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 CSPG4P5Q96PW8 444 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 LHX5Q9H2C1 402 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 SSU72Q9NP77 194 aaKnown RBP9.49□□□□□ -0.89
CSMD1-217ENST00000602723 CFL2Q9Y281 166 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 WASF2Q9Y6W5 498 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 IFT172Q9UG01 1749 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 CEP250Q9BV73 2442 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 GRK5P34947 590 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 TTC29Q8NA56 475 aaPredicted RBP9.49□□□□□ -0.89
CSMD1-217ENST00000602723 OR6K2Q8NGY2 324 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 OR10A6Q8NH74 314 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 MEGF6O75095 1541 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 C9JVG2 144 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 CXCR6O00574 342 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 CXCL11O14625 94 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 PSMD10O75832 226 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 IL17AQ16552 155 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 GPR153Q6NV75 609 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 KXD1Q9BQD3 176 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 SH3D21A4FU49 640 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 NEDD8-MDP1E9PL57 170 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 OR1I1O60431 355 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 TPST2O60704 377 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 PRKD3O94806 890 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 MMP8P22894 467 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 ADCYAP1R1P41586 468 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 EIPR1Q53HC9 387 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 ADGRD1Q6QNK2 874 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 UNC5BQ8IZJ1 945 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 SETD6Q8TBK2 473 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 GPR21Q99679 349 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 ZNF350Q9GZX5 532 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 ZNF69Q9UC07 566 aa9.49□□□□□ -0.89
CSMD1-217ENST00000602723 MRPS23Q9Y3D9 190 aaKnown RBP9.49□□□□□ -0.89
CSMD1-217ENST00000602723 KANTRA0A1W2PQU2 76 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 NOBOXO60393 691 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 SLC2A2P11168 524 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 FSHRP23945 695 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ARCN1P48444 511 aaKnown RBP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 TEAD4Q15561 434 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 C9orf57Q5W0N0 161 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 FSTL4Q6MZW2 842 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 RASGEF1AQ8N9B8 481 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 BTN2A3PQ96KV6 586 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 DOPEY2Q9Y3R5 2298 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 SPATA31A5Q5VU36 1347 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 SPATA31A7Q8IWB4 1347 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 MFSD11O43934 449 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 POU2F1P14859 743 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 C2orf80Q0P641 193 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 TIGD6Q17RP2 521 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ATXN7L2Q5T6C5 722 aaPredicted RBP9.48□□□□□ -0.89
CSMD1-217ENST00000602723 FOXO6A8MYZ6 492 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 CD2P06729 351 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 ASGR1P07306 291 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 PTPRAP18433 802 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 NPR2P20594 1047 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 CDKN2BP42772 138 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 KHKP50053 298 aa9.48□□□□□ -0.89
CSMD1-217ENST00000602723 VLDLRP98155 873 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms