RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 LILRB5O75023 590 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 APBB3O95704 486 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 PBLDP30039 288 aaPredicted RBP17.66■□□□□ 0.42
VRK3-225ENST00000601912 IGFALSP35858 605 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 RPS9P46781 194 aaKnown RBP17.66■□□□□ 0.42
VRK3-225ENST00000601912 ALDH18A1P54886 795 aaKnown RBP17.66■□□□□ 0.42
VRK3-225ENST00000601912 NAA20P61599 178 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 PLOD1Q02809 727 aaPredicted RBP17.66■□□□□ 0.42
VRK3-225ENST00000601912 SF3A3Q12874 501 aaKnown RBP eCLIP17.66■□□□□ 0.42
VRK3-225ENST00000601912 TMEM31Q5JXX7 168 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 CRTC3Q6UUV7 619 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 FOXJ1Q92949 421 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 GLMNQ92990 594 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 ASB2Q96Q27 587 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 TRIM54Q9BYV2 358 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 ILKAPQ9H0C8 392 aaPredicted RBP17.66■□□□□ 0.42
VRK3-225ENST00000601912 NPHS2Q9NP85 383 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 FZD3Q9NPG1 666 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 UTP6Q9NYH9 597 aaKnown RBP17.66■□□□□ 0.42
VRK3-225ENST00000601912 FAM8A1Q9UBU6 413 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 SIT1Q9Y3P8 196 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 OARD1Q9Y530 152 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 DNMT3AQ9Y6K1 912 aaPredicted RBP17.66■□□□□ 0.42
VRK3-225ENST00000601912 SLC5A10A0PJK1 596 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 PABPN1LA6NDY0 278 aaKnown RBP17.65■□□□□ 0.42
VRK3-225ENST00000601912 NCF1BA6NI72 391 aaPredicted RBP17.65■□□□□ 0.42
VRK3-225ENST00000601912 NCF1CA8MVU1 366 aaPredicted RBP17.65■□□□□ 0.42
VRK3-225ENST00000601912 STX16-NPEPL1H3BU86 382 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 STX16O14662 325 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 POP7O75817 140 aaKnown RBP17.65■□□□□ 0.42
VRK3-225ENST00000601912 NCF1P14598 390 aaPredicted RBP17.65■□□□□ 0.42
VRK3-225ENST00000601912 VCLP18206 1134 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 HNRNPA2B1P22626 353 aaKnown RBP17.65■□□□□ 0.42
VRK3-225ENST00000601912 CD6P30203 668 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 MAPK9P45984 424 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 SP140Q13342 867 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 ZNF678Q5SXM1 525 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 LRRTM4Q86VH4 590 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 VRK3Q8IV63 474 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 WDR75Q8IWA0 830 aaKnown RBP17.65■□□□□ 0.42
VRK3-225ENST00000601912 PIWIL2Q8TC59 973 aaKnown RBP17.65■□□□□ 0.42
VRK3-225ENST00000601912 THOC1Q96FV9 657 aaKnown RBP17.65■□□□□ 0.42
VRK3-225ENST00000601912 TOE1Q96GM8 510 aaKnown RBP17.65■□□□□ 0.42
VRK3-225ENST00000601912 TRMOQ9BU70 441 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 APOOQ9BUR5 198 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 RDH14Q9HBH5 336 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 EML4Q9HC35 981 aaKnown RBP17.65■□□□□ 0.42
VRK3-225ENST00000601912 CDYLQ9Y232 598 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 DNAJC16Q9Y2G8 782 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 DOCK9Q9BZ29 2069 aa17.65■□□□□ 0.42
VRK3-225ENST00000601912 MGAT4DA6NG13 374 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 TMEM202A6NGA9 273 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 SLC16A5O15375 505 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 FFAR2O15552 330 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 LATO43561 262 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 SUPT7LO94864 414 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 ENO2P09104 434 aaPredicted RBP17.64■□□□□ 0.42
VRK3-225ENST00000601912 AKT2P31751 481 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 CCR3P51677 355 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 CCR5P51681 352 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 PRKAA1Q13131 559 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 PPP1R3AQ16821 1122 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 ARL13AQ5H913 290 aaPredicted RBP17.64■□□□□ 0.42
VRK3-225ENST00000601912 UBE2R2Q712K3 238 aaPredicted RBP17.64■□□□□ 0.42
VRK3-225ENST00000601912 ZNF547Q8IVP9 402 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 CFAP206Q8IYR0 622 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 OR2L2Q8NH16 312 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 HM13Q8TCT9 377 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 ASB11Q8WXH4 323 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 SORT1Q99523 831 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 MYOCQ99972 504 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 PLCD4Q9BRC7 762 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 RMI1Q9H9A7 625 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 WSB2Q9NYS7 404 aaPredicted RBP17.64■□□□□ 0.42
VRK3-225ENST00000601912 ADAMTS6Q9UKP5 1117 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 ARL2BPQ9Y2Y0 163 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 RAP2CQ9Y3L5 183 aa17.64■□□□□ 0.42
VRK3-225ENST00000601912 KLHL33A6NCF5 533 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 KMOO15229 486 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 GRID2O43424 1007 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 HOXC4P09017 264 aaPredicted RBP17.64■□□□□ 0.41
VRK3-225ENST00000601912 HIST1H2AGP0C0S8 130 aaPredicted RBP17.64■□□□□ 0.41
VRK3-225ENST00000601912 KITP10721 976 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 HIST1H2ADP20671 130 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 HK3P52790 923 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 ARHGAP8P85298 464 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 KIAA0895LQ68EN5 471 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 ZNF771Q7L3S4 317 aaPredicted RBP17.64■□□□□ 0.41
VRK3-225ENST00000601912 AMZ2Q86W34 360 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 CAMKK1Q8N5S9 505 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 MOCOSQ96EN8 888 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 HIST1H2AHQ96KK5 128 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 FOPNLQ96NB1 174 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 HIST1H2AJQ99878 128 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 SIKE1Q9BRV8 207 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 H2AFJQ9BTM1 129 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 SLC12A9Q9BXP2 914 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 PARVBQ9HBI1 364 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 ACSS2Q9NR19 701 aa17.64■□□□□ 0.41
VRK3-225ENST00000601912 MARCOQ9UEW3 520 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms