RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 BPGMP07738 259 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 PNLIPRP1P54315 467 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 RAB4BP61018 213 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 PAOXQ6QHF9 649 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 TRIM43Q96BQ3 446 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-218ENST00000601538 TSNAXQ99598 290 aaKnown RBP12.09□□□□□ -0.47
SHANK2-218ENST00000601538 DISP2A7MBM2 1401 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 PRR5-ARHGAP8B1AHC4 643 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 GABBR2O75899 941 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 CALCAP01258 141 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 CTBP2P56545 445 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ARHGAP8P85298 464 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 RABL3Q5HYI8 236 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 UNC5AQ6ZN44 842 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 USP49Q70CQ1 688 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ZNF563Q8TA94 476 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ELMO1Q92556 727 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 MSANTD3Q96H12 275 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ZSCAN5AQ9BUG6 496 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ASB7Q9H672 318 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ZDHHC7Q9NXF8 308 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 TRPV2Q9Y5S1 764 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ATAD5Q96QE3 1844 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 FGF1P05230 155 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 LIMK2P53671 638 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 E2F1Q01094 437 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 TBRG1Q3YBR2 411 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 GPR158Q5T848 1215 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 DRICH1Q6PGQ1 229 aaPredicted RBP12.09□□□□□ -0.47
SHANK2-218ENST00000601538 BAIAP2L2Q6UXY1 529 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 GPR65Q8IYL9 337 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 TMEM161BQ8NDZ6 487 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 RAET1EQ8TD07 263 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 MKRN2Q9H000 416 aaKnown RBP12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ZNF700Q9H0M5 742 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 MALT1Q9UDY8 824 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 SCP2D1Q9UJQ7 156 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 LINC00032P0C843 101 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 AGTR1P30556 359 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 GRB10Q13322 594 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 SELPLGQ14242 412 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 COL28A1Q2UY09 1125 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 SUSD4Q5VX71 490 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 UBR7Q8N806 425 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 ANKFN1Q8N957 763 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 TOR3AQ9H497 397 aa12.09□□□□□ -0.47
SHANK2-218ENST00000601538 TDRD3Q9H7E2 651 aaKnown RBP12.09□□□□□ -0.47
SHANK2-218ENST00000601538 HCN1O60741 890 aa12.08□□□□□ -0.47
SHANK2-218ENST00000601538 ABCB7O75027 752 aa12.08□□□□□ -0.47
SHANK2-218ENST00000601538 NPPAP01160 153 aa12.08□□□□□ -0.47
SHANK2-218ENST00000601538 IFNA4P05014 189 aa12.08□□□□□ -0.47
SHANK2-218ENST00000601538 ZNF143P52747 638 aaPredicted RBP12.08□□□□□ -0.47
SHANK2-218ENST00000601538 ATP13A1Q9HD20 1204 aa12.08□□□□□ -0.47
SHANK2-218ENST00000601538 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.47
SHANK2-218ENST00000601538 A0A1B0GVI7 797 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 TCRBV9S1A1TA0A576 114 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 URODP06132 367 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 C6orf222P0C671 652 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-218ENST00000601538 RAP2AP10114 183 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 YBX3P16989 372 aaKnown RBP eCLIP12.08□□□□□ -0.482e-6■■■■□ 20.7
SHANK2-218ENST00000601538 GNPDA1P46926 289 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 HSDL1Q3SXM5 330 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 RNASEH2BQ5TBB1 312 aaKnown RBP12.08□□□□□ -0.48
SHANK2-218ENST00000601538 TMEM86AQ8N2M4 240 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 KLHL36Q8N4N3 616 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 HERC2P3Q9BVR0 1158 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 ABCC13Q9NSE7 274 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 PSMB4P28070 264 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 SLC37A3Q8NCC5 494 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 ANGPTL6Q8NI99 470 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 ZNHIT2Q9UHR6 403 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 SCN2AQ99250 2005 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 TEX13CA0A0J9YWL9 993 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 KERAO60938 352 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 GADD45AP24522 165 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 GRM3Q14832 879 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 OGFOD2Q6N063 350 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 PRELID2Q8N945 189 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 BPIFB1Q8TDL5 484 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 TAS1R2Q8TE23 839 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 OTUB2Q96DC9 234 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 RETREG1Q9H6L5 497 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 LYARQ9NX58 379 aaKnown RBP12.08□□□□□ -0.48
SHANK2-218ENST00000601538 ERBB3P21860 1342 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 TUBGCP6Q96RT7 1819 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 DCLK1O15075 740 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 CD247P20963 164 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 CD79BP40259 229 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 SV2AQ7L0J3 742 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 ASRGL1Q7L266 308 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 SPG21Q9NZD8 308 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 C9IYK1 514 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 RFPL2O75678 378 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 LAMP2P13473 410 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 RPA4Q13156 261 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 METTL25Q8N6Q8 603 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 PBDC1Q9BVG4 233 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 ERVK-5Q9HDB9 667 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 C19orf12Q9NSK7 152 aa12.08□□□□□ -0.48
SHANK2-218ENST00000601538 HSPB11Q9Y547 144 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms