RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 TBC1D25Q3MII6 688 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 AMZ1Q400G9 498 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 TMEM71Q6P5X7 295 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 ZNF574Q6ZN55 896 aaPredicted RBP15.84■□□□□ 0.13
LSM4-206ENST00000600289 MICALCLQ6ZW33 695 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 GPR155Q7Z3F1 870 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 PPIL6Q8IXY8 311 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 MPP5Q8N3R9 675 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 SNIP1Q8TAD8 396 aaKnown RBP15.84■□□□□ 0.13
LSM4-206ENST00000600289 ZFPM2Q8WW38 1151 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 ZNF578Q96N58 590 aaPredicted RBP15.84■□□□□ 0.13
LSM4-206ENST00000600289 SERPINB12Q96P63 405 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 NUDT22Q9BRQ3 303 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 CCM2Q9BSQ5 444 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 ASCL3Q9NQ33 180 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 AK5Q9Y6K8 562 aa15.84■□□□□ 0.13
LSM4-206ENST00000600289 DOPEY2Q9Y3R5 2298 aa15.83■□□□□ 0.13
LSM4-206ENST00000600289 IGHV5-10-1A0A0J9YXX1 117 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 OR52A4PA6NMU1 304 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 F8W8V4 182 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 MPOP05164 745 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 THRAP10827 490 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 NMBRP28336 390 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 PBLDP30039 288 aaPredicted RBP15.83■□□□□ 0.12
LSM4-206ENST00000600289 PPARGP37231 505 aaPredicted RBP15.83■□□□□ 0.12
LSM4-206ENST00000600289 PAFAH1B1P43034 410 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 ETF1P62495 437 aaKnown RBP15.83■□□□□ 0.12
LSM4-206ENST00000600289 CRADDP78560 199 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 RPA4Q13156 261 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 PPP1R7Q15435 360 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 RPE65Q16518 533 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 FASTKD1Q53R41 847 aaKnown RBP15.83■□□□□ 0.12
LSM4-206ENST00000600289 C3orf38Q5JPI3 329 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 RNASEH2BQ5TBB1 312 aaKnown RBP15.83■□□□□ 0.12
LSM4-206ENST00000600289 KIAA0930Q6ICG6 404 aaPredicted RBP15.83■□□□□ 0.12
LSM4-206ENST00000600289 CAPRIN2Q6IMN6 1127 aaKnown RBP15.83■□□□□ 0.12
LSM4-206ENST00000600289 RAB11FIP2Q7L804 512 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 HOOK3Q86VS8 718 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 ZNF761Q86XN6 746 aaPredicted RBP15.83■□□□□ 0.12
LSM4-206ENST00000600289 TRIM48Q8IWZ4 208 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 OR6P1Q8NGX9 317 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 CXorf40BQ96DE9 158 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 CAPZA3Q96KX2 299 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 FOXP3Q9BZS1 431 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 SEMA4CQ9C0C4 833 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 SEMA6CQ9H3T2 930 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 COG4Q9H9E3 785 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 RDH14Q9HBH5 336 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 EPB41L5Q9HCM4 733 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 CATSPERZQ9NTU4 200 aa15.83■□□□□ 0.12
LSM4-206ENST00000600289 MN1Q10571 1320 aaPredicted RBP15.83■□□□□ 0.12
LSM4-206ENST00000600289 MAGEB16A2A368 324 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 CDRT15L2A8MXV6 281 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 DNALI1O14645 258 aaPredicted RBP15.82■□□□□ 0.12
LSM4-206ENST00000600289 PLD2O14939 933 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 WISP1O95388 367 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 FTH1P02794 183 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 ITGA2BP08514 1039 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 SLC35G4P0C7Q5 338 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 MTHFD1P11586 935 aaKnown RBP15.82■□□□□ 0.12
LSM4-206ENST00000600289 ARNTP27540 789 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 CD151P48509 253 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 TTPAP49638 278 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 SEMA3AQ14563 771 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 KCTD19Q17RG1 926 aaPredicted RBP15.82■□□□□ 0.12
LSM4-206ENST00000600289 NKAIN2Q5VXU1 208 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 PCGF5Q86SE9 256 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 CLEC14AQ86T13 490 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 CFAP206Q8IYR0 622 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 CLDN19Q8N6F1 224 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 AHCYL2Q96HN2 611 aaKnown RBP15.82■□□□□ 0.12
LSM4-206ENST00000600289 RMDN2Q96LZ7 410 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 SLC46A1Q96NT5 459 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 CMKLR1Q99788 373 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 TBC1D10AQ9BXI6 508 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 B3GNT4Q9C0J1 378 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 RAB33BQ9H082 229 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 WWP1Q9H0M0 922 aa15.82■□□□□ 0.12
LSM4-206ENST00000600289 TEP1Q99973 2627 aaKnown RBP15.81■□□□□ 0.12
LSM4-206ENST00000600289 FAM237BA0A1B0GVD1 139 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 SDR42E2A6NKP2 422 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 LIN7AO14910 233 aaPredicted RBP15.81■□□□□ 0.12
LSM4-206ENST00000600289 CD3EAPO15446 510 aaKnown RBP15.81■□□□□ 0.12
LSM4-206ENST00000600289 AVILO75366 819 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 OR56A5P0C7T3 313 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 IVDP26440 423 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 RBMS1P29558 406 aaKnown RBP15.81■□□□□ 0.12
LSM4-206ENST00000600289 DHX34Q14147 1143 aaKnown RBP15.81■□□□□ 0.12
LSM4-206ENST00000600289 GPR18Q14330 331 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 LRRC69Q6ZNQ3 347 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 USP53Q70EK8 1073 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 FBXO39Q8N4B4 442 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 GPR150Q8NGU9 434 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 NAT14Q8WUY8 206 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 MFSD3Q96ES6 412 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 CCDC74BQ96LY2 380 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 INSM2Q96T92 566 aaPredicted RBP15.81■□□□□ 0.12
LSM4-206ENST00000600289 OR52A5Q9H2C5 316 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 THSD1Q9NS62 852 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 OGFRQ9NZT2 677 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms