RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 CSNK1G3Q9Y6M4 447 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 ZFC3H1O60293 1989 aaKnown RBP18.51■□□□□ 0.55
CCDC9-205ENST00000600117 SPTA1P02549 2419 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 UBA6A0AVT1 1052 aaPredicted RBP18.51■□□□□ 0.55
CCDC9-205ENST00000600117 LMO7DNF2Z398 122 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 QSOX1O00391 747 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 PFDN6O15212 129 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 AHSGP02765 367 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 PRB1P04280 392 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 MCM3P25205 808 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 FMO4P31512 558 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 CLCNKAP51800 687 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 EIF3BP55884 814 aaKnown RBP18.51■□□□□ 0.55
CCDC9-205ENST00000600117 ILF3Q12906 894 aaKnown RBP eCLIP18.51■□□□□ 0.55
CCDC9-205ENST00000600117 CAMK2BQ13554 666 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 EFTUD2Q15029 972 aaKnown RBP eCLIP18.51■□□□□ 0.558e-8■■■■■ 31.4
CCDC9-205ENST00000600117 ELOCQ15369 112 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 KBTBD12Q3ZCT8 623 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 ZNF549Q6P9A3 640 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 DBX2Q6ZNG2 339 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 SLC26A11Q86WA9 606 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 LKAAEAR1Q8TD35 194 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 SLC39A7Q92504 469 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 MCMBPQ9BTE3 642 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 GSDMCQ9BYG8 508 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 RABGEF1Q9UJ41 708 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 KCNK6Q9Y257 313 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 PCDHB1Q9Y5F3 818 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 ARID1BQ8NFD5 2236 aaPredicted RBP18.51■□□□□ 0.55
CCDC9-205ENST00000600117 HECTD1Q9ULT8 2610 aa18.51■□□□□ 0.55
CCDC9-205ENST00000600117 MGAT4DA6NG13 374 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 RIPK2O43353 540 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 C1QL1O75973 258 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 ABHD2P08910 425 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 OR56A5P0C7T3 313 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 PHBP35232 272 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 ABCG1P45844 678 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 DMPKQ09013 629 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 INSCQ1MX18 579 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 FAM83HQ6ZRV2 1179 aaPredicted RBP18.5■□□□□ 0.55
CCDC9-205ENST00000600117 SDR16C5Q8N3Y7 309 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 CCM2Q9BSQ5 444 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 ACSS3Q9H6R3 686 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 KLC4Q9NSK0 619 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 GNPTGQ9UJJ9 305 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 MED16Q9Y2X0 877 aa18.5■□□□□ 0.55
CCDC9-205ENST00000600117 IQCF5A8MTL0 148 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 YY2O15391 372 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 FLRT2O43155 660 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 KCNJ13O60928 360 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 ESR1P03372 595 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 TUBBP07437 444 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 PKMP14618 531 aaKnown RBP18.49■□□□□ 0.55
CCDC9-205ENST00000600117 PBLDP30039 288 aaPredicted RBP18.49■□□□□ 0.55
CCDC9-205ENST00000600117 ACTR1BP42025 376 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 CD151P48509 253 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 ACTR1AP61163 376 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 PTRHD1Q6GMV3 140 aaKnown RBP18.49■□□□□ 0.55
CCDC9-205ENST00000600117 SLC30A9Q6PML9 568 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 STRA8Q7Z7C7 330 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 TAF8Q7Z7C8 310 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 AMZ2Q86W34 360 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 GKN2Q86XP6 184 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 KRT222Q8N1A0 295 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 OR2L2Q8NH16 312 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 CDKL2Q92772 493 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 SPATS2LQ9NUQ6 558 aaKnown RBP18.49■□□□□ 0.55
CCDC9-205ENST00000600117 NSMCE4AQ9NXX6 385 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 TAAR2Q9P1P5 351 aa18.49■□□□□ 0.55
CCDC9-205ENST00000600117 ARHGEF17Q96PE2 2063 aaPredicted RBP18.48■□□□□ 0.55
CCDC9-205ENST00000600117 C17orf113A0A1B0GUU1 675 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 A6NCN8 305 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 TRIM38O00635 465 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 TPP1O14773 563 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 ATXN7O15265 892 aaPredicted RBP18.48■□□□□ 0.55
CCDC9-205ENST00000600117 NIPSNAP2O75323 286 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 FTH1P02794 183 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 GSTM1P09488 218 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 GSTM4Q03013 218 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 NAB1Q13506 487 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 NFE2L1Q14494 772 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 UAP1Q16222 522 aaPredicted RBP18.48■□□□□ 0.55
CCDC9-205ENST00000600117 DEFB133Q30KQ1 61 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 EMBQ6PCB8 327 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 LVRNQ6Q4G3 990 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 ZC3HC1Q86WB0 502 aaKnown RBP18.48■□□□□ 0.55
CCDC9-205ENST00000600117 MARCH9Q86YJ5 346 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 CTAGE3PQ8IX95 158 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 LILRA3Q8N6C8 439 aaPredicted RBP18.48■□□□□ 0.55
CCDC9-205ENST00000600117 PPM1NQ8N819 430 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 UHMK1Q8TAS1 419 aaKnown RBP18.48■□□□□ 0.55
CCDC9-205ENST00000600117 HM13Q8TCT9 377 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 RHBDD1Q8TEB9 315 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 CAVIN3Q969G5 261 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 CYTH2Q99418 400 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 AARSD1Q9BTE6 412 aaKnown RBP18.48■□□□□ 0.55
CCDC9-205ENST00000600117 NLGN3Q9NZ94 848 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 BTBD3Q9Y2F9 522 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 DNAJC16Q9Y2G8 782 aa18.48■□□□□ 0.55
CCDC9-205ENST00000600117 A0A087WUV0 522 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms