RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 A0A1W2PPM1 405 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 CSF2P04141 144 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 C2P06681 752 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 CBSLP0DN79 551 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 NME1P15531 152 aaKnown RBP21.46■■□□□ 1.03
LTBP4-224ENST00000599016 CBSP35520 551 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 CTSKP43235 329 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 HSPA14Q0VDF9 509 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 ILF3Q12906 894 aaKnown RBP eCLIP21.46■■□□□ 1.03
LTBP4-224ENST00000599016 ZNF460Q14592 562 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 ZNF542PQ5EBM4 170 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 KCTD16Q68DU8 428 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 PAQR3Q6TCH7 311 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 TBC1D1Q86TI0 1168 aaPredicted RBP21.46■■□□□ 1.03
LTBP4-224ENST00000599016 CFAP206Q8IYR0 622 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 TSNARE1Q96NA8 513 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 SH3GL2Q99962 352 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 COG4Q9H9E3 785 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 TM7SF3Q9NS93 570 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 SLC23A2Q9UGH3 650 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 APOBEC3BQ9UH17 382 aaKnown RBP21.46■■□□□ 1.03
LTBP4-224ENST00000599016 PNMA8BQ9ULN7 279 aaPredicted RBP21.46■■□□□ 1.03
LTBP4-224ENST00000599016 SLC6A14Q9UN76 642 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 DNAJC16Q9Y2G8 782 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 KNL1Q8NG31 2342 aa21.46■■□□□ 1.03
LTBP4-224ENST00000599016 TMEM131Q92545 1883 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 RALGAPA1Q6GYQ0 2036 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 EIF3FO00303 357 aaPredicted RBP21.45■■□□□ 1.02
LTBP4-224ENST00000599016 SCAMP1O15126 338 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 ENO3P13929 434 aaPredicted RBP21.45■■□□□ 1.02
LTBP4-224ENST00000599016 MPLP40238 635 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 SLC26A3P40879 764 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 IL2P60568 153 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 HNRNPKP61978 463 aaKnown RBP eCLIP21.45■■□□□ 1.023e-6■■■□□ 15.1
LTBP4-224ENST00000599016 DMPKQ09013 629 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 RPA4Q13156 261 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 KIF19Q2TAC6 998 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 LRRC8EQ6NSJ5 796 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 SRRM1Q8IYB3 904 aaKnown RBP21.45■■□□□ 1.02
LTBP4-224ENST00000599016 GIMAP7Q8NHV1 300 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 SLC30A3Q99726 388 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 GSDMCQ9BYG8 508 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 TMEM168Q9H0V1 697 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 ARRDC1-AS1Q9H2J1 176 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 OSGEPL1Q9H4B0 414 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 PCMTD2Q9NV79 361 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.45■■□□□ 1.02
LTBP4-224ENST00000599016 SNX11Q9Y5W9 270 aa21.45■■□□□ 1.02
LTBP4-224ENST00000599016 SLC5A10A0PJK1 596 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 GPC4O75487 556 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 SLC35E2BP0CK96 405 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 PYGBP11216 843 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 ZNF37AP17032 561 aaPredicted RBP21.44■■□□□ 1.02
LTBP4-224ENST00000599016 IDSP22304 550 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 CLCNKAP51800 687 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 PGGT1BP53609 377 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 CTBSQ01459 385 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 NFE2L1Q14494 772 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 PUM1Q14671 1186 aaKnown RBP eCLIP21.44■■□□□ 1.021e-7■□□□□ 9
LTBP4-224ENST00000599016 HSP90B2PQ58FF3 399 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 TRIM61Q5EBN2 209 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 SLC23A3Q6PIS1 610 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 IL27RAQ6UWB1 636 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 NAPRTQ6XQN6 538 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 CPNE9Q8IYJ1 553 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 GLMNQ92990 594 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 SMC6Q96SB8 1091 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 NUSAP1Q9BXS6 441 aaKnown RBP21.44■■□□□ 1.02
LTBP4-224ENST00000599016 ZDHHC5Q9C0B5 715 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 DLL3Q9NYJ7 618 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 SPASTQ9UBP0 616 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 KLF15Q9UIH9 416 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 ACSL5Q9ULC5 683 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 NOVA2Q9UNW9 492 aaKnown RBP21.44■■□□□ 1.02
LTBP4-224ENST00000599016 KCNK6Q9Y257 313 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 PLEKHM1Q9Y4G2 1056 aa21.44■■□□□ 1.02
LTBP4-224ENST00000599016 FOXO6A8MYZ6 492 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 GOLGA8RI6L899 631 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 DFNA5O60443 496 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 SYPP08247 313 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 CCDC166P0CW27 439 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 COL6A2P12110 1019 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 KRT4P19013 534 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 ARRB1P49407 418 aaPredicted RBP21.43■■□□□ 1.02
LTBP4-224ENST00000599016 CSRP3P50461 194 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 ELOCQ15369 112 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 ZNF658BQ4V348 819 aaPredicted RBP21.43■■□□□ 1.02
LTBP4-224ENST00000599016 TNFAIP8L3Q5GJ75 292 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 PPM1JQ5JR12 505 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 MYO1HQ8N1T3 1032 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 FSTL5Q8N475 847 aaPredicted RBP21.43■■□□□ 1.02
LTBP4-224ENST00000599016 GPBAR1Q8TDU6 330 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 ARL8AQ96BM9 186 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 ALKBH8Q96BT7 664 aaKnown RBP21.43■■□□□ 1.02
LTBP4-224ENST00000599016 LINGO1Q96FE5 620 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 ATP6V1G3Q96LB4 118 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 TCEAL2Q9H3H9 227 aaPredicted RBP21.43■■□□□ 1.02
LTBP4-224ENST00000599016 CAPN10Q9HC96 672 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 GMEB2Q9UKD1 530 aa21.43■■□□□ 1.02
LTBP4-224ENST00000599016 ACTL7BQ9Y614 415 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms