RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 HGFP14210 728 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 MPSTP25325 297 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 EIF2S3P41091 472 aaKnown RBP16.36■□□□□ 0.21
SSBP4-204ENST00000597724 PAFAH1B1P43034 410 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 MAPK9P45984 424 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 PTK6Q13882 451 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 AARS2Q5JTZ9 985 aaKnown RBP16.36■□□□□ 0.21
SSBP4-204ENST00000597724 CES3Q6UWW8 571 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 MPP5Q8N3R9 675 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 RCBTB1Q8NDN9 531 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 GPR150Q8NGU9 434 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 RMDN2Q96LZ7 410 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 C12orf66Q96MD2 445 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 SERPINB12Q96P63 405 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 OR52A5Q9H2C5 316 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 COG4Q9H9E3 785 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 THSD1Q9NS62 852 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 IMP3Q9NV31 184 aaKnown RBP16.36■□□□□ 0.21
SSBP4-204ENST00000597724 LOXL2Q9Y4K0 774 aa16.36■□□□□ 0.21
SSBP4-204ENST00000597724 CFAP20Q9Y6A4 193 aaKnown RBP16.36■□□□□ 0.21
SSBP4-204ENST00000597724 MAGEB16A2A368 324 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 SDR42E2A6NKP2 422 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 CCDC188H7C350 402 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 AGRPO00253 132 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 VAPBO95292 243 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 FTH1P02794 183 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 OR56A5P0C7T3 313 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 JMJD7P0C870 316 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 IVDP26440 423 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 ARNTP27540 789 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 MAGEA3P43357 314 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 TTPAP49638 278 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 ETF1P62495 437 aaKnown RBP16.35■□□□□ 0.21
SSBP4-204ENST00000597724 RPA4Q13156 261 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 RNASEH2BQ5TBB1 312 aaKnown RBP16.35■□□□□ 0.21
SSBP4-204ENST00000597724 ARHGAP22Q7Z5H3 698 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 CLEC14AQ86T13 490 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 LDB1Q86U70 411 aaPredicted RBP16.35■□□□□ 0.21
SSBP4-204ENST00000597724 PLXDC1Q8IUK5 500 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 KLHL7Q8IXQ5 586 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 ZFPM2Q8WW38 1151 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 ZMYND15Q9H091 742 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 AKAP7Q9P0M2 348 aaPredicted RBP16.35■□□□□ 0.21
SSBP4-204ENST00000597724 SAMD15Q9P1V8 674 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 PISDQ9UG56 409 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 ASIC3Q9UHC3 531 aa16.35■□□□□ 0.21
SSBP4-204ENST00000597724 A0A087WV48 116 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 DNALI1O14645 258 aaPredicted RBP16.34■□□□□ 0.21
SSBP4-204ENST00000597724 LIN7AO14910 233 aaPredicted RBP16.34■□□□□ 0.21
SSBP4-204ENST00000597724 C9P02748 559 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 TYRP1P17643 537 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 AMD1P17707 334 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 ITIH1P19827 911 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 PDHA2P29803 388 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 ETV5P41161 510 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 ARCN1P48444 511 aaKnown RBP16.34■□□□□ 0.21
SSBP4-204ENST00000597724 CD151P48509 253 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 CASC4Q6P4E1 433 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 ZNF449Q6P9G9 518 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 SYDE1Q6ZW31 735 aaPredicted RBP16.34■□□□□ 0.21
SSBP4-204ENST00000597724 AGBL5Q8NDL9 886 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 SIGLEC10Q96LC7 697 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 RUNDC3BQ96NL0 473 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 PCDHGA7Q9Y5G6 932 aa16.34■□□□□ 0.21
SSBP4-204ENST00000597724 MN1Q10571 1320 aaPredicted RBP16.34■□□□□ 0.21
SSBP4-204ENST00000597724 ZFHX4Q86UP3 3567 aa16.33■□□□□ 0.21
SSBP4-204ENST00000597724 FAM237BA0A1B0GVD1 139 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 F8W8V4 182 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 CCL4P13236 92 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 CASQ1P31415 396 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 CSTF2P33240 577 aaKnown RBP eCLIP16.33■□□□□ 0.2
SSBP4-204ENST00000597724 CAPZBP47756 277 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 PREPP48147 710 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 PCBP4P57723 403 aaKnown RBP16.33■□□□□ 0.2
SSBP4-204ENST00000597724 DR1Q01658 176 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 ANKRD20A4Q4UJ75 823 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 SNAP47Q5SQN1 464 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 KIAA0930Q6ICG6 404 aaPredicted RBP16.33■□□□□ 0.2
SSBP4-204ENST00000597724 DUS1LQ6P1R4 473 aaKnown RBP16.33■□□□□ 0.2
SSBP4-204ENST00000597724 PCGF5Q86SE9 256 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 TMEM135Q86UB9 458 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 HOOK3Q86VS8 718 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 AGGF1Q8N302 714 aaeCLIP16.33■□□□□ 0.2
SSBP4-204ENST00000597724 ZNF248Q8NDW4 579 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 ELMO1Q92556 727 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 RSC1A1Q92681 617 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 DCBLD2Q96PD2 775 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 TRIM56Q9BRZ2 755 aaKnown RBP16.33■□□□□ 0.2
SSBP4-204ENST00000597724 RAB33BQ9H082 229 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 KIR3DX1Q9H7L2 352 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 EPHA6Q9UF33 1036 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 HEBP2Q9Y5Z4 205 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 COLEC10Q9Y6Z7 277 aa16.33■□□□□ 0.2
SSBP4-204ENST00000597724 CHD6Q8TD26 2715 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 SLC5A10A0PJK1 596 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 A8MU76 341 aa16.32■□□□□ 0.2
SSBP4-204ENST00000597724 IFRD1O00458 451 aaPredicted RBP16.32■□□□□ 0.2
SSBP4-204ENST00000597724 PRMT5O14744 637 aaPredicted RBP16.32■□□□□ 0.2
SSBP4-204ENST00000597724 NVLO15381 856 aaKnown RBP16.32■□□□□ 0.2
SSBP4-204ENST00000597724 RRP8O43159 456 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms