RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 GOLGA8TH3BQL2 631 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 PAMP19021 973 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 PDHA2P29803 388 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 MAPK9P45984 424 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 PREPP48147 710 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 MRPS25P82663 173 aaKnown RBP21.42■■□□□ 1.02
HOMER3-206ENST00000594439 RPA4Q13156 261 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 PHF19Q5T6S3 580 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 HIBCHQ6NVY1 386 aaPredicted RBP21.42■■□□□ 1.02
HOMER3-206ENST00000594439 DUS1LQ6P1R4 473 aaKnown RBP21.42■■□□□ 1.02
HOMER3-206ENST00000594439 TMEM71Q6P5X7 295 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 PROSER1Q86XN7 944 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 STAMBPL1Q96FJ0 436 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 CCDC74BQ96LY2 380 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 PDP2Q9P2J9 529 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 PCDHGA8Q9Y5G5 932 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 MAD1L1Q9Y6D9 718 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 ASPMQ8IZT6 3477 aa21.42■■□□□ 1.02
HOMER3-206ENST00000594439 APC2O95996 2303 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 PRMT5O14744 637 aaPredicted RBP21.41■■□□□ 1.02
HOMER3-206ENST00000594439 LIN7AO14910 233 aaPredicted RBP21.41■■□□□ 1.02
HOMER3-206ENST00000594439 DXOO77932 396 aaKnown RBP21.41■■□□□ 1.02
HOMER3-206ENST00000594439 USP1O94782 785 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 SEC31AO94979 1220 aaKnown RBP21.41■■□□□ 1.02
HOMER3-206ENST00000594439 ITGA8P53708 1063 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 DHX9Q08211 1270 aaKnown RBP21.41■■□□□ 1.02
HOMER3-206ENST00000594439 EIF3IQ13347 325 aaKnown RBP21.41■■□□□ 1.02
HOMER3-206ENST00000594439 C16orf72Q14CZ0 275 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 ST3GAL2Q16842 350 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 TYSND1Q2T9J0 566 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 MSS51Q4VC12 460 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 MRNIPQ6NTE8 343 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 WDR74Q6RFH5 385 aaPredicted RBP21.41■■□□□ 1.02
HOMER3-206ENST00000594439 IGF2-ASQ6U949 168 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 RAB11FIP2Q7L804 512 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 ZNF572Q7Z3I7 529 aaPredicted RBP21.41■■□□□ 1.02
HOMER3-206ENST00000594439 OTUD6BQ8N6M0 293 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 LKAAEAR1Q8TD35 194 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 NCSTNQ92542 709 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 ELMO1Q92556 727 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 SNF8Q96H20 258 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 CARD6Q9BX69 1037 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 TRIM31Q9BZY9 425 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 P2RY12Q9H244 342 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 IL1RAPL1Q9NZN1 696 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 ZMIZ1Q9ULJ6 1067 aa21.41■■□□□ 1.02
HOMER3-206ENST00000594439 SLC5A10A0PJK1 596 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 FAM187AA6NFU0 413 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 EFCAB8A8MWE9 144 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 F8W8V4 182 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 SMAPO00193 183 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 TP73O15350 636 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 NDUFS3O75489 264 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 BANF1O75531 89 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 UBXN7O94888 489 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 THRAP10827 490 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 RPS3P23396 243 aaKnown RBP eCLIP21.4■■□□□ 1.02
HOMER3-206ENST00000594439 MPSTP25325 297 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 RPL21P46778 160 aaKnown RBP21.4■■□□□ 1.02
HOMER3-206ENST00000594439 PPM1FP49593 454 aaPredicted RBP21.4■■□□□ 1.02
HOMER3-206ENST00000594439 TRA2AQ13595 282 aaKnown RBP eCLIP21.4■■□□□ 1.02
HOMER3-206ENST00000594439 NEPROQ6NW34 567 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 NAPRTQ6XQN6 538 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 SDCCAG8Q86SQ7 713 aaPredicted RBP21.4■■□□□ 1.02
HOMER3-206ENST00000594439 LSMEM2Q8N112 164 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 FBXO39Q8N4B4 442 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 PWWP2AQ96N64 755 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 TCF12Q99081 682 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 ASCL3Q9NQ33 180 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 CDC23Q9UJX2 597 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 LOXL2Q9Y4K0 774 aa21.4■■□□□ 1.02
HOMER3-206ENST00000594439 ACACAQ13085 2346 aa21.39■■□□□ 1.02
HOMER3-206ENST00000594439 IQCF5A8MTL0 148 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 PLD2O14939 933 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 RAD51CO43502 376 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 HGFP14210 728 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 TYRP1P17643 537 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 ITGB6P18564 788 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 OGNP20774 298 aaKnown RBP21.39■■□□□ 1.01
HOMER3-206ENST00000594439 CCR7P32248 378 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 CD151P48509 253 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 BBS9Q3SYG4 887 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 DNAJC21Q5F1R6 531 aaKnown RBP21.39■■□□□ 1.01
HOMER3-206ENST00000594439 ZNF449Q6P9G9 518 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 CENPUQ71F23 418 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 LRRC6Q86X45 466 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 RCBTB1Q8NDN9 531 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 ZFPM2Q8WW38 1151 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 JPH3Q8WXH2 748 aaPredicted RBP21.39■■□□□ 1.01
HOMER3-206ENST00000594439 LPGAT1Q92604 370 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 TMEM159Q96B96 161 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 EBNA1BP2Q99848 306 aaKnown RBP21.39■■□□□ 1.01
HOMER3-206ENST00000594439 ZMYND15Q9H091 742 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 SNX24Q9Y343 169 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 FAM169AQ9Y6X4 670 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 USP24Q9UPU5 2620 aa21.39■■□□□ 1.01
HOMER3-206ENST00000594439 MN1Q10571 1320 aaPredicted RBP21.38■■□□□ 1.01
HOMER3-206ENST00000594439 AGRPO00253 132 aa21.38■■□□□ 1.01
HOMER3-206ENST00000594439 HGSO14964 777 aaPredicted RBP21.38■■□□□ 1.01
HOMER3-206ENST00000594439 TLX3O43711 291 aaPredicted RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms