RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 PPP3R2Q96LZ3 170 aa16.31■□□□□ 0.2
PRKCSH-217ENST00000592741 RNF208Q9H0X6 261 aa16.31■□□□□ 0.2
PRKCSH-217ENST00000592741 AGPAT4Q9NRZ5 378 aa16.31■□□□□ 0.2
PRKCSH-217ENST00000592741 CLEC4EQ9ULY5 219 aa16.31■□□□□ 0.2
PRKCSH-217ENST00000592741 SLC4A7Q9Y6M7 1214 aa16.31■□□□□ 0.2
PRKCSH-217ENST00000592741 TRAV19A0A0A6YYK7 116 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 ABHD14A-ACY1A0A1B0GW23 586 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 EME2A4GXA9 379 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 SAC3D1A6NKF1 404 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 IFRD1O00458 451 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 INPP4BO15327 924 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 ENO2P09104 434 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 BMP1P13497 986 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 CKMT2P17540 419 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 MSH3P20585 1137 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 RFC2P35250 354 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 PTPN5P54829 565 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 SNRPD1P62314 119 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 CREB5Q02930 508 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 GPRC6AQ5T6X5 926 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 INTS11Q5TA45 600 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 NANOGP8Q6NSW7 305 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 CYP20A1Q6UW02 462 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 PRR23BQ6ZRT6 265 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 KIAA2013Q8IYS2 634 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 NXPE1Q8N323 547 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 DPP10Q8N608 796 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 TMEM79Q9BSE2 394 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 NANOGQ9H9S0 305 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 OPTCQ9UBM4 332 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 TBX21Q9UL17 535 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 POLR3HQ9Y535 204 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 KANSL1LA0AUZ9 987 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 SOCS2O14508 198 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 ZNF821O75541 412 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 LRG1P02750 347 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 TFAP2AP05549 437 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 G6PDP11413 515 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 DEFB103AP81534 67 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 APOFQ13790 326 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 ABRAXAS2Q15018 415 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 CRY1Q16526 586 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 CYP51A1Q16850 503 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 AP5B1Q2VPB7 878 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 DGKKQ5KSL6 1271 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 SLC2A7Q6PXP3 512 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 ZSWIM9Q86XI8 627 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 HS6ST3Q8IZP7 471 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 UBTD2Q8WUN7 234 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 VWCEQ96DN2 955 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 LYSMD1Q96S90 227 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 HBEGFQ99075 208 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 CD244Q9BZW8 370 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 INTS7Q9NVH2 962 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 ZMYM5Q9UJ78 669 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 COMMD3-BMI1R4GMX3 469 aa16.3■□□□□ 0.2
PRKCSH-217ENST00000592741 A8MX80 341 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 UMPSP11172 480 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 MTHFD1P11586 935 aaKnown RBP16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 CCL5P13501 91 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 ATP6V1B1P15313 513 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 OXTRP30559 389 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 ADRM1Q16186 407 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 PHKG1Q16816 387 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 CWF19L1Q69YN2 538 aaKnown RBP16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 KRT80Q6KB66 452 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 TSPAN33Q86UF1 283 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 PROSER1Q86XN7 944 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 TMC8Q8IU68 726 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 HID1Q8IV36 788 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 TRPV3Q8NET8 790 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 CENPNQ96H22 339 aaPredicted RBP16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 TMEM74Q96NL1 305 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 C9orf16Q9BUW7 83 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 SLAMF8Q9P0V8 285 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 RNF11Q9Y3C5 154 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 LTBP2Q14767 1821 aa16.29■□□□□ 0.2
PRKCSH-217ENST00000592741 NPIPB15A6NHN6 443 aaPredicted RBP16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 ARNTLO00327 626 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 RGS14O43566 566 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 TPST1O60507 370 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 HTR1EP28566 365 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 PPM1AP35813 382 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 METTL2BQ6P1Q9 378 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 CRTC1Q6UUV9 634 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 GPR65Q8IYL9 337 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 DIS3LQ8TF46 1054 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 RHBDF1Q96CC6 855 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 ASIC4Q96FT7 647 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 RPL10LQ96L21 214 aaKnown RBP16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 LRRC3Q9BY71 257 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 ANKRD60Q9BZ19 345 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 GRIP2Q9C0E4 1043 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 RDH14Q9HBH5 336 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 LATS2Q9NRM7 1088 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 PNPLA3Q9NST1 481 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 TMEM39AQ9NV64 488 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 KCTD5Q9NXV2 234 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 ANAPC2Q9UJX6 822 aa16.28■□□□□ 0.2
PRKCSH-217ENST00000592741 INTS6Q9UL03 887 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms