RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 RCBTB1Q8NDN9 531 aa17.16■□□□□ 0.34
CIRBP-235ENST00000591935 OR10G6Q8NH81 332 aa17.16■□□□□ 0.34
CIRBP-235ENST00000591935 BCAS4Q8TDM0 211 aa17.16■□□□□ 0.34
CIRBP-235ENST00000591935 SPATA16Q9BXB7 569 aa17.16■□□□□ 0.34
CIRBP-235ENST00000591935 GPR63Q9BZJ6 419 aa17.16■□□□□ 0.34
CIRBP-235ENST00000591935 CCDC134Q9H6E4 229 aa17.16■□□□□ 0.34
CIRBP-235ENST00000591935 ATXN10Q9UBB4 475 aa17.16■□□□□ 0.34
CIRBP-235ENST00000591935 NFKBIL1Q9UBC1 381 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-235ENST00000591935 TBC1D29Q9UFV1 150 aa17.16■□□□□ 0.34
CIRBP-235ENST00000591935 KCNK6Q9Y257 313 aa17.16■□□□□ 0.34
CIRBP-235ENST00000591935 ZNF711Q9Y462 761 aa17.16■□□□□ 0.34
CIRBP-235ENST00000591935 SDK2Q58EX2 2172 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 EXOC1LA0A1B0GW35 172 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 SMIM23A6NLE4 172 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 OR5K4A6NMS3 321 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 GRID2O43424 1007 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 NUAK1O60285 661 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 C1QL1O75973 258 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 TMEM63AO94886 807 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 SLC4A1P02730 911 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 ACP5P13686 325 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 ZNF8P17098 575 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-235ENST00000591935 MPSTP25325 297 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 CSF2RBP32927 897 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 CSTF2P33240 577 aaKnown RBP eCLIP17.15■□□□□ 0.341e-14■■□□□ 12.3
CIRBP-235ENST00000591935 PPM1FP49593 454 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-235ENST00000591935 SLC18A1P54219 525 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 SRSF6Q13247 344 aaKnown RBP17.15■□□□□ 0.34
CIRBP-235ENST00000591935 SKIDA1Q1XH10 827 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 FNBP1LQ5T0N5 605 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 TMEM71Q6P5X7 295 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 IYDQ6PHW0 289 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 SLC9B2Q86UD5 537 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 PALM2Q8IXS6 379 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 CNPY4Q8N129 248 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 TRAM1L1Q8N609 369 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 AGBL5Q8NDL9 886 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 HTR3CQ8WXA8 447 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 CCDC74BQ96LY2 380 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 TAAR9Q96RI9 348 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-235ENST00000591935 ZMYND15Q9H091 742 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 VPS37BQ9H9H4 285 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 TRIM39Q9HCM9 518 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 SARS2Q9NP81 518 aaKnown RBP17.15■□□□□ 0.34
CIRBP-235ENST00000591935 RAB6BQ9NRW1 208 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 FOXJ2Q9P0K8 574 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 TMEM9Q9P0T7 183 aa17.15■□□□□ 0.34
CIRBP-235ENST00000591935 COL6A6A6NMZ7 2263 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 CFAP46Q8IYW2 2715 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 HELZ2Q9BYK8 2649 aaKnown RBP17.14■□□□□ 0.33
CIRBP-235ENST00000591935 KIR2DS5A0A0G2JLQ3 304 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 A0A0G2JNG1 304 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 TCRBV7S3A2A0A539 114 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 C9orf172C9J069 976 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 F5H423 210 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-235ENST00000591935 KIR2DS3K7RE56 304 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 DUX1O43812 170 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 SLC25A14O95258 325 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-235ENST00000591935 NDST3O95803 873 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 FAM107AO95990 144 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 THRAP10827 490 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 BPIP17213 487 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 CLCNKAP51800 687 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 HNRNPH2P55795 449 aaKnown RBP17.14■□□□□ 0.33
CIRBP-235ENST00000591935 SARNPP82979 210 aaKnown RBP17.14■□□□□ 0.33
CIRBP-235ENST00000591935 HHEXQ03014 270 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 SEMA5AQ13591 1074 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 KIR2DS5Q14953 304 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-235ENST00000591935 KDELC1Q6UW63 502 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 ADGRG6Q86SQ4 1221 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 ZFAND4Q86XD8 727 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 PHYKPLQ8IUZ5 450 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 TTC9Q92623 222 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 VAT1Q99536 393 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 SELENOSQ9BQE4 189 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 EPB41L1Q9H4G0 881 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 ETNK1Q9HBU6 452 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 EIF2B3Q9NR50 452 aaKnown RBP17.14■□□□□ 0.33
CIRBP-235ENST00000591935 TMPRSS11EQ9UL52 423 aa17.14■□□□□ 0.33
CIRBP-235ENST00000591935 A6NCN8 305 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-235ENST00000591935 SNX2O60749 519 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 EPOP01588 193 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 FGF3P11487 239 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-235ENST00000591935 MLNP12872 115 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 F3P13726 295 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 CHN1P15882 459 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 NFKB1P19838 968 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 CHRNA4P43681 627 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 EPHA4P54764 986 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 GPX6P59796 221 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 FASTKD3Q14CZ7 662 aaKnown RBP17.13■□□□□ 0.33
CIRBP-235ENST00000591935 BBS9Q3SYG4 887 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 MANEAQ5SRI9 462 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 KIAA1614Q5VZ46 1190 aa17.13■□□□□ 0.33
CIRBP-235ENST00000591935 TTC19Q6DKK2 380 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-235ENST00000591935 WDR74Q6RFH5 385 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-235ENST00000591935 XKR5Q6UX68 686 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms