RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 CXCL12P48061 93 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 SLC1A6P48664 564 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 PXNP49023 591 aaPredicted RBP17.11■□□□□ 0.33
CXXC1-212ENST00000589940 PPP1R3AQ16821 1122 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 FRA10AC1Q70Z53 315 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 C11orf96Q7Z7L8 435 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 LRRTM4Q86VH4 590 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 OR2L2Q8NH16 312 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 PCYT1BQ9Y5K3 369 aaPredicted RBP17.11■□□□□ 0.33
CXXC1-212ENST00000589940 TMEM114B3SHH9 223 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 POP7O75817 140 aaKnown RBP17.11■□□□□ 0.33
CXXC1-212ENST00000589940 GFAPP14136 432 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 CLDN2P57739 230 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 TGFBIQ15582 683 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 FAM160A2Q8N612 972 aaPredicted RBP17.11■□□□□ 0.33
CXXC1-212ENST00000589940 FRMD1Q8N878 549 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 PTGR2Q8N8N7 351 aaPredicted RBP17.11■□□□□ 0.33
CXXC1-212ENST00000589940 ZNF473Q8WTR7 871 aaKnown RBP17.11■□□□□ 0.33
CXXC1-212ENST00000589940 SKA2Q8WVK7 121 aaPredicted RBP17.11■□□□□ 0.33
CXXC1-212ENST00000589940 TMEM237Q96Q45 408 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 C20orf27Q9GZN8 174 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 EBF2Q9HAK2 575 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 ADAMTS6Q9UKP5 1117 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 TMCO1Q9UM00 188 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 SLC17A4Q9Y2C5 497 aa17.11■□□□□ 0.33
CXXC1-212ENST00000589940 MUC3AQ02505 3323 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 MGAT4DA6NG13 374 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 KLK8O60259 260 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 NUDT1P36639 197 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 CCR3P51677 355 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 HK3P52790 923 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 KIAA1024LP59773 190 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 ABCE1P61221 599 aaKnown RBP17.1■□□□□ 0.33
CXXC1-212ENST00000589940 ARHGAP8P85298 464 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 PFKFB4Q16877 469 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 CWF19L1Q69YN2 538 aaKnown RBP17.1■□□□□ 0.33
CXXC1-212ENST00000589940 FBXO39Q8N4B4 442 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 LILRA3Q8N6C8 439 aaPredicted RBP17.1■□□□□ 0.33
CXXC1-212ENST00000589940 HM13Q8TCT9 377 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 EDAQ92838 391 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 BIRC7Q96CA5 298 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 GRAMD1AQ96CP6 724 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 ZNF395Q9H8N7 513 aaPredicted RBP17.1■□□□□ 0.33
CXXC1-212ENST00000589940 NUDT4Q9NZJ9 180 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 DMTF1Q9Y222 760 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 PRKAB1Q9Y478 270 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 OARD1Q9Y530 152 aa17.1■□□□□ 0.33
CXXC1-212ENST00000589940 DNMT3AQ9Y6K1 912 aaPredicted RBP17.1■□□□□ 0.33
CXXC1-212ENST00000589940 GRID2O43424 1007 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 ITM2AO43736 263 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 CEACAM5P06731 702 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 C8GP07360 202 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 IMPDH1P20839 514 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 PREPP48147 710 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 PLOD1Q02809 727 aaPredicted RBP17.09■□□□□ 0.33
CXXC1-212ENST00000589940 CGB2Q6NT52 195 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 MAMSTRQ6ZN01 415 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 GCNT7Q6ZNI0 430 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 RAB44Q7Z6P3 723 aaPredicted RBP17.09■□□□□ 0.33
CXXC1-212ENST00000589940 CFAP206Q8IYR0 622 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 SLC22A15Q8IZD6 547 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 OXR1Q8N573 874 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 CCNYL1Q8N7R7 359 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 TMEM145Q8NBT3 493 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 ASB11Q8WXH4 323 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 L3HYPDHQ96EM0 354 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 BMFQ96LC9 184 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 DRC3Q9H069 523 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 RMI1Q9H9A7 625 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 COG4Q9H9E3 785 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 UTP6Q9NYH9 597 aaKnown RBP17.09■□□□□ 0.33
CXXC1-212ENST00000589940 DLGAP2Q9P1A6 1054 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 CA5BQ9Y2D0 317 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 HS3ST3A1Q9Y663 406 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 NCF1BA6NI72 391 aaPredicted RBP17.09■□□□□ 0.33
CXXC1-212ENST00000589940 NCF1CA8MVU1 366 aaPredicted RBP17.09■□□□□ 0.33
CXXC1-212ENST00000589940 PRAMEF26H0Y7S4 382 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 H0Y8X5 98 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 K7ESF4 209 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 KMOO15229 486 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 LYPLA1O75608 230 aaPredicted RBP17.09■□□□□ 0.33
CXXC1-212ENST00000589940 PDGFBP01127 241 aaPredicted RBP17.09■□□□□ 0.33
CXXC1-212ENST00000589940 NCF1P14598 390 aaPredicted RBP17.09■□□□□ 0.33
CXXC1-212ENST00000589940 ARRB2P32121 409 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 PFN3P60673 137 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 HERVK_113P63132 956 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 SP140Q13342 867 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 RCN2Q14257 317 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 PLA2G4EQ3MJ16 856 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 CFAP157Q5JU67 520 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 AMZ2Q86W34 360 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 DLG3Q92796 817 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 ELAC2Q9BQ52 826 aaKnown RBP17.09■□□□□ 0.33
CXXC1-212ENST00000589940 ERVK-6Q9BXR3 956 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 RDH14Q9HBH5 336 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 CD274Q9NZQ7 290 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 ZNHIT2Q9UHR6 403 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.09■□□□□ 0.33
CXXC1-212ENST00000589940 BDP1A6H8Y1 2624 aa17.09■□□□□ 0.33
CXXC1-212ENST00000589940 KLHL33A6NCF5 533 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms