RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SLC38A3Q99624 504 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 COPS8Q99627 209 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 SLC30A3Q99726 388 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 STRADBQ9C0K7 418 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 FAM96AQ9H5X1 160 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 EPB41L5Q9HCM4 733 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 SARS2Q9NP81 518 aaKnown RBP10.19□□□□□ -0.78
SDF2-208ENST00000589788 NPHS2Q9NP85 383 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 CASS4Q9NQ75 786 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 EIF2B3Q9NR50 452 aaKnown RBP10.19□□□□□ -0.78
SDF2-208ENST00000589788 KCNK4Q9NYG8 393 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 SLC23A2Q9UGH3 650 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 ENTPD2Q9Y5L3 495 aa10.19□□□□□ -0.78
SDF2-208ENST00000589788 A6NCN8 305 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 MROH6A6NGR9 719 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 H7C0S8 307 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 B4GAT1O43505 415 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 CPNE6O95741 557 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 KRT14P02533 472 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 MPOP05164 745 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 CA5AP35218 305 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 COILP38432 576 aaPredicted RBP10.18□□□□□ -0.78
SDF2-208ENST00000589788 GRIA1P42261 906 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 HALP42357 657 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 CTSCP53634 463 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 INHBCP55103 352 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 SESN2P58004 480 aaPredicted RBP10.18□□□□□ -0.78
SDF2-208ENST00000589788 GABREP78334 506 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 SARNPP82979 210 aaKnown RBP10.18□□□□□ -0.78
SDF2-208ENST00000589788 B4GALNT1Q00973 533 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 CACNG1Q06432 222 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 GPS1Q13098 491 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 NR1D2Q14995 579 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 RTP5Q14D33 572 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 SEPT7Q16181 437 aaKnown RBP10.18□□□□□ -0.78
SDF2-208ENST00000589788 C3orf38Q5JPI3 329 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 TTC27Q6P3X3 843 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 FOXR1Q6PIV2 292 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 CCDC137Q6PK04 289 aaKnown RBP10.18□□□□□ -0.78
SDF2-208ENST00000589788 NLRP9Q7RTR0 991 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 PIM3Q86V86 326 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 GALNT12Q8IXK2 581 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 CEP112Q8N8E3 955 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 MNS1Q8NEH6 495 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 PPHLN1Q8NEY8 458 aaKnown RBP10.18□□□□□ -0.78
SDF2-208ENST00000589788 OR10G6Q8NH81 332 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 GRK7Q8WTQ7 553 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 HEXDCQ8WVB3 486 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.18□□□□□ -0.78
SDF2-208ENST00000589788 CXorf40BQ96DE9 158 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 SGF29Q96ES7 293 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 AHCYL2Q96HN2 611 aaKnown RBP10.18□□□□□ -0.78
SDF2-208ENST00000589788 CDKN2AIPNLQ96HQ2 116 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 RANBP9Q96S59 729 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.18□□□□□ -0.78
SDF2-208ENST00000589788 FOXP3Q9BZS1 431 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 POLR1BQ9H9Y6 1135 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 SMARCAL1Q9NZC9 954 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 CPNE7Q9UBL6 633 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 DKK4Q9UBT3 224 aa10.18□□□□□ -0.78
SDF2-208ENST00000589788 ATXN7L1Q9ULK2 861 aaPredicted RBP10.18□□□□□ -0.78
SDF2-208ENST00000589788 COL27A1Q8IZC6 1860 aaPredicted RBP10.18□□□□□ -0.78
SDF2-208ENST00000589788 CCDC187A0A096LP49 1063 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 KLHL33A6NCF5 533 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 AGAP14A8MT82 685 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 CCDC188H7C350 402 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 BRINP1O60477 761 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 PHF2O75151 1096 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 VIPP01282 170 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 ATP1B2P14415 290 aaPredicted RBP10.17□□□□□ -0.78
SDF2-208ENST00000589788 TPSB2P20231 275 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 ACRV1P26436 265 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 RPL10P27635 214 aaKnown RBP10.17□□□□□ -0.78
SDF2-208ENST00000589788 LSSP48449 732 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 NPY2RP49146 381 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 TERF1P54274 439 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 DRG2P55039 364 aaKnown RBP10.17□□□□□ -0.78
SDF2-208ENST00000589788 PRAMEP78395 509 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 GPLD1P80108 840 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 CDK16Q00536 496 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 TPSAB1Q15661 275 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 CYP1B1Q16678 543 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 CLPPQ16740 277 aaPredicted RBP10.17□□□□□ -0.78
SDF2-208ENST00000589788 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.17□□□□□ -0.78
SDF2-208ENST00000589788 PHF19Q5T6S3 580 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 TSTD2Q5T7W7 516 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 AGAP9Q5VTM2 703 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 AFTPHQ6ULP2 937 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 WASH2PQ6VEQ5 465 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 USP53Q70EK8 1073 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 C11orf96Q7Z7L8 435 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 B3GNT8Q7Z7M8 397 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 SERPINA9Q86WD7 417 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 ZNF761Q86XN6 746 aaPredicted RBP10.17□□□□□ -0.78
SDF2-208ENST00000589788 PROSER1Q86XN7 944 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 LSMEM2Q8N112 164 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 WDR36Q8NI36 951 aaKnown RBP10.17□□□□□ -0.78
SDF2-208ENST00000589788 TTC1Q99614 292 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 VPS37BQ9H9H4 285 aa10.17□□□□□ -0.78
SDF2-208ENST00000589788 RDH14Q9HBH5 336 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms