RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 COL27A1Q8IZC6 1860 aaPredicted RBP13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 IFRD1O00458 451 aaPredicted RBP13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 CD3EAPO15446 510 aaKnown RBP13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 OR1I1O60431 355 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 TMEM63AO94886 807 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 FTH1P02794 183 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 ABCG1P45844 678 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 PREPP48147 710 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 GFERP55789 205 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 SEMA3AQ14563 771 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 BRD3Q15059 726 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 COL28A1Q2UY09 1125 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 TMEM164Q5U3C3 297 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 XKR5Q6UX68 686 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 PACS1Q6VY07 963 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 CLEC14AQ86T13 490 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 LDB1Q86U70 411 aaPredicted RBP13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 FAM129CQ86XR2 697 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 ELMO1Q92556 727 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 RMDN2Q96LZ7 410 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 TGM7Q96PF1 710 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 KIFC1Q9BW19 673 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 TREX1Q9NSU2 369 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 SAMD15Q9P1V8 674 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 PDP2Q9P2J9 529 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 ASIC3Q9UHC3 531 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 PCDHGA7Q9Y5G6 932 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 COLEC10Q9Y6Z7 277 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 RP1P56715 2156 aa13.78□□□□□ -0.2
CLPTM1-210ENST00000589158 EFCAB7A8K855 629 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 F8W8V4 182 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 NVLO15381 856 aaKnown RBP13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 CAPN5O15484 640 aaPredicted RBP13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 KLK10O43240 276 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 PRAMEF10O60809 474 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 RASSF9O75901 435 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 VAPBO95292 243 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 GSTM1P09488 218 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 FGF3P11487 239 aaPredicted RBP13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 PAFAH1B1P43034 410 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 CAPZBP47756 277 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 GSTM4Q03013 218 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 MYLKQ15746 1914 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 SYTL3Q4VX76 610 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 CAPRIN2Q6IMN6 1127 aaKnown RBP13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 IRGCQ6NXR0 463 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 KLHL35Q6PF15 583 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 ARHGAP22Q7Z5H3 698 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 CAND1Q86VP6 1230 aaKnown RBP13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 CREG2Q8IUH2 290 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 SPACA3Q8IXA5 215 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 KLHL7Q8IXQ5 586 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 C17orf53Q8N3J3 647 aaPredicted RBP13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 MPP5Q8N3R9 675 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 MCUQ8NE86 351 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 RSC1A1Q92681 617 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 MFSD3Q96ES6 412 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 SGSM3Q96HU1 749 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 C9orf72Q96LT7 481 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 FERD3LQ96RJ6 166 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 MRM3Q9HC36 420 aaKnown RBP13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 XAB2Q9HCS7 855 aaKnown RBP13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 OCIAD1Q9NX40 245 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 SLC39A1Q9NY26 324 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 MARCH4Q9P2E8 410 aaPredicted RBP13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 SOX13Q9UN79 622 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 LHX6Q9UPM6 363 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 HEBP2Q9Y5Z4 205 aa13.77□□□□□ -0.21
CLPTM1-210ENST00000589158 MN1Q10571 1320 aaPredicted RBP13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 SDR42E2A6NKP2 422 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 LIN7AO14910 233 aaPredicted RBP13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 NDUFS3O75489 264 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 C9P02748 559 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 MLNP12872 115 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 ITGB6P18564 788 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 NDUFS1P28331 727 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 PDHA2P29803 388 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 LEPRP48357 1165 aaKnown RBP13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 TTPAP49638 278 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 RPA4Q13156 261 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 BOP1Q14137 746 aaKnown RBP13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 BROXQ5VW32 411 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 NAPRTQ6XQN6 538 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 FAM92BQ6ZTR7 304 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 SDCCAG8Q86SQ7 713 aaPredicted RBP13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 PPIL6Q8IXY8 311 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 NAT8LQ8N9F0 302 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 PHC3Q8NDX5 983 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 ZFPM2Q8WW38 1151 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 ART4Q93070 314 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 ZDHHC12Q96GR4 267 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 SERPINB12Q96P63 405 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 TAAR9Q96RI9 348 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 TSSK1BQ9BXA7 367 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 DPH1Q9BZG8 443 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 OR52A5Q9H2C5 316 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 FOXJ2Q9P0K8 574 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 SLC24A2Q9UI40 661 aa13.76□□□□□ -0.21
CLPTM1-210ENST00000589158 ZNF106Q9H2Y7 1883 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms