RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 PRICKLE4Q2TBC4 344 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 ZNF648Q5T619 568 aaPredicted RBP7.8□□□□□ -1.16
ATG4D-210ENST00000588972 TRIM65Q6PJ69 517 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 C16orf89Q6UX73 402 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 GBP6Q6ZN66 633 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 GALNT5Q7Z7M9 940 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 ITIH5Q86UX2 942 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 UNC93AQ86WB7 457 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 CRYBG2Q8N1P7 616 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 FAR2Q96K12 515 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 GCNAQ96QF7 691 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 KCNK16Q96T55 309 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 ALOXE3Q9BYJ1 711 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 NDST4Q9H3R1 872 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 STN1Q9H668 368 aaKnown RBP7.8□□□□□ -1.16
ATG4D-210ENST00000588972 GLOD4Q9HC38 313 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 SIX2Q9NPC8 291 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 NOX1Q9Y5S8 564 aa7.8□□□□□ -1.16
ATG4D-210ENST00000588972 ATP8B3O60423 1300 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 HELZ2Q9BYK8 2649 aaKnown RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 TRGV11A0A075B6L2 103 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 A1L4Q6 167 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 BCLAF3A2AJT9 711 aaKnown RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 SRRM3A6NNA2 597 aaPredicted RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 A8MVJ9 347 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 NOL4O94818 638 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 LETM1O95202 739 aaPredicted RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 APBB3O95704 486 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 PNMA6AP0CW24 399 aaPredicted RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 PEPDP12955 493 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 ACP5P13686 325 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 CEACAM1P13688 526 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 ZNF18P17022 549 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 CSRP1P21291 193 aaKnown RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 COMTP21964 271 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 TBXAS1P24557 533 aaPredicted RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 ANXA13P27216 316 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 CDC25CP30307 473 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 STAT1P42224 750 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 KLK7P49862 253 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 COPB1P53618 953 aaKnown RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 MAP3K7CLP57077 242 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 RPL10AP62906 217 aaKnown RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 GCNT1Q02742 428 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 GOLGA7BQ2TAP0 167 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 SPDYE7PQ495Y7 208 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 FAM69AQ5T7M9 428 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 SNX30Q5VWJ9 437 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 DENND1BQ6P3S1 775 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 TMEM270Q6UE05 265 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 VSTM1Q6UX27 236 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 CLEC20AQ6ZU45 233 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 DENND5BQ6ZUT9 1274 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 MAVSQ7Z434 540 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 TMEM150AQ86TG1 271 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 LSM14AQ8ND56 463 aaKnown RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 SMARCD1Q96GM5 515 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 BPIFA3Q9BQP9 254 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 ANP32EQ9BTT0 268 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 SCNM1Q9BWG6 230 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 NAT10Q9H0A0 1025 aaKnown RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 GHITMQ9H3K2 345 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 TASP1Q9H6P5 420 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 UBE2TQ9NPD8 197 aaPredicted RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 DMAP1Q9NPF5 467 aaPredicted RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 TMEM9BQ9NQ34 198 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 SLC12A4Q9UP95 1085 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 NAALADL1Q9UQQ1 740 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 KIAA1549LQ6ZVL6 1849 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 ASCC3Q8N3C0 2202 aaKnown RBP7.79□□□□□ -1.16
ATG4D-210ENST00000588972 ATG2BQ96BY7 2078 aa7.79□□□□□ -1.16
ATG4D-210ENST00000588972 GTPBP10A4D1E9 387 aaKnown RBP7.78□□□□□ -1.16
ATG4D-210ENST00000588972 TULP2O00295 520 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 TRDMT1O14717 391 aaKnown RBP7.78□□□□□ -1.16
ATG4D-210ENST00000588972 AHCYL1O43865 530 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 PTP4A3O75365 173 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 TIPRLO75663 272 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 NCR1O76036 304 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 EGFP01133 1207 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 FAM200BP0CF97 657 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 CSH1P0DML2 217 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 CSH2P0DML3 217 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 KRT5P13647 590 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 PAFAH1B1P43034 410 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 ZNF132P52740 706 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 YWHAEP62258 255 aaKnown RBP7.78□□□□□ -1.16
ATG4D-210ENST00000588972 EIF2B5Q13144 721 aaKnown RBP7.78□□□□□ -1.16
ATG4D-210ENST00000588972 SEC23BQ15437 767 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 FBXO43Q4G163 708 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 DPY19L2P1Q6NXN4 242 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 APTXQ7Z2E3 356 aaKnown RBP7.78□□□□□ -1.16
ATG4D-210ENST00000588972 LUZP1Q86V48 1076 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 CIR1Q86X95 450 aaPredicted RBP7.78□□□□□ -1.16
ATG4D-210ENST00000588972 TTC39CQ8N584 583 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 CREB3L4Q8TEY5 395 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 TFAP2BQ92481 460 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 EXOC4Q96A65 974 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 ARRDC3Q96B67 414 aa7.78□□□□□ -1.16
ATG4D-210ENST00000588972 CHFRQ96EP1 664 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms