RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 PRKAB1Q9Y478 270 aa16.65■□□□□ 0.26
SCAMP4-211ENST00000588907 A0A1B0GTQ1 180 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 SLC5A10A0PJK1 596 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 PROB1E7EW31 1015 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 TPP1O14773 563 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 GPC4O75487 556 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 ALDOAP04075 364 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 ZNF806P0C7X5 589 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 ZNF883P0CG24 379 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 COL6A2P12110 1019 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 ZNF37AP17032 561 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 ITGB6P18564 788 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 HALP42357 657 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 CCT8P50990 548 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 KPNA2P52292 529 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 ATXN3P54252 364 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 CTBSQ01459 385 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 HSPA14Q0VDF9 509 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 GBX1Q14549 363 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 PLA2G4EQ3MJ16 856 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 AGAP9Q5VTM2 703 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 TBC1D1Q86TI0 1168 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 CFAP206Q8IYR0 622 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 AVL9Q8NBF6 648 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 SIDT2Q8NBJ9 832 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 ZNF548Q8NEK5 533 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 LKAAEAR1Q8TD35 194 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 PDLIM5Q96HC4 596 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 OSGEPL1Q9H4B0 414 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 KLF15Q9UIH9 416 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 PCOLCE2Q9UKZ9 415 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 PNMA8BQ9ULN7 279 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 DOLKQ9UPQ8 538 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 ACOT9Q9Y305 439 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 PCDH15Q96QU1 1955 aa16.64■□□□□ 0.25
SCAMP4-211ENST00000588907 PRR19A6NJB7 356 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 OR5K4A6NMS3 321 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 LMO7DNF2Z398 122 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 IFRD1O00458 451 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 AQP9O43315 295 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 PIAS2O75928 621 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 RPN2P04844 631 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 SLC35G4P0C7Q5 338 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 ACTR1BP42025 376 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 ACTR1AP61163 376 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 BNC1Q01954 994 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 NFE2L1Q14494 772 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 FAM83EQ2M2I3 478 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 HLA-BQ31612 363 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 KLC3Q6P597 504 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 TAF8Q7Z7C8 310 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 PIM3Q86V86 326 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 CEP97Q8IW35 865 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 SLC22A15Q8IZD6 547 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 MYO1HQ8N1T3 1032 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 MZB1Q8WU39 189 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 ALKBH8Q96BT7 664 aaKnown RBP16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 FOPNLQ96NB1 174 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 GAREM1Q9H706 876 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 CAB39LQ9H9S4 337 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 TM7SF3Q9NS93 570 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 GULP1Q9UBP9 304 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 SLC23A2Q9UGH3 650 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 KCNK6Q9Y257 313 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 DNAJC16Q9Y2G8 782 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 PCYT1BQ9Y5K3 369 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 ACTL7BQ9Y614 415 aa16.63■□□□□ 0.25
SCAMP4-211ENST00000588907 MYO15AQ9UKN7 3530 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 ZFC3H1O60293 1989 aaKnown RBP16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 A0A096LPK6 155 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 WISP3O95389 354 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 C2P06681 752 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 SLC35E2BP0CK96 405 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 MPC1LP0DKB6 136 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 ALPPL2P10696 532 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 ENGP17813 658 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 EPHA8P29322 1005 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 CSRP3P50461 194 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 ATP6V0D1P61421 351 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 TIAL1Q01085 375 aaKnown RBP eCLIP16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 GPS2Q13227 327 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 TSNAXIP1Q2TAA8 658 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 INAVAQ3KP66 663 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 ZNF542PQ5EBM4 170 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 KCTD16Q68DU8 428 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 PAQR3Q6TCH7 311 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 CMC1Q7Z7K0 106 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 PDZD3Q86UT5 571 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 GIMAP7Q8NHV1 300 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 LMX1AQ8TE12 382 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 NAT14Q8WUY8 206 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 FAM136AQ96C01 138 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 UBXN10Q96LJ8 280 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 DUSP23Q9BVJ7 150 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 DERL2Q9GZP9 239 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 CENPHQ9H3R5 247 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 HEBP2Q9Y5Z4 205 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 MUC6Q6W4X9 2439 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 DMDP11532 3685 aa16.62■□□□□ 0.25
SCAMP4-211ENST00000588907 PDZK1P1A8MUH7 402 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms