RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 HPDP32754 393 aaPredicted RBP22.21■■□□□ 1.15
ACTN4-210ENST00000588618 SLC26A3P40879 764 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 PLOD1Q02809 727 aaPredicted RBP22.21■■□□□ 1.15
ACTN4-210ENST00000588618 FZD2Q14332 565 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 CSHL1Q14406 222 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 FAM83EQ2M2I3 478 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 KLC3Q6P597 504 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 RABEPKQ7Z6M1 372 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 KCTD4Q8WVF5 259 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 UBXN10Q96LJ8 280 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 PRRX2Q99811 253 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 TIMM29Q9BSF4 260 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 TM7SF3Q9NS93 570 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 DCDC2Q9UHG0 476 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 PILRBQ9UKJ0 227 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 DGKBQ9Y6T7 804 aa22.21■■□□□ 1.15
ACTN4-210ENST00000588618 TDRD6O60522 2096 aaKnown RBP22.2■■□□□ 1.15
ACTN4-210ENST00000588618 KCNJ13O60928 360 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 CBSLP0DN79 551 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 COL6A2P12110 1019 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 OAS2P29728 719 aaKnown RBP22.2■■□□□ 1.14
ACTN4-210ENST00000588618 CBSP35520 551 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 HK3P52790 923 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 LRP8Q14114 963 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 AGAP9Q5VTM2 703 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 LRRC8EQ6NSJ5 796 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 OXR1Q8N573 874 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 LINGO1Q96FE5 620 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 APOPT1Q96IL0 206 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 LRFN3Q9BTN0 628 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 OSGEPL1Q9H4B0 414 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 KCNK9Q9NPC2 374 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 IGSF5Q9NSI5 407 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 DNAJC28Q9NX36 388 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 FANCMQ8IYD8 2048 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 SCAMP1O15126 338 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 GLRA3O75311 464 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 LTA4HP09960 611 aaKnown RBP22.2■■□□□ 1.14
ACTN4-210ENST00000588618 ENO3P13929 434 aaPredicted RBP22.2■■□□□ 1.14
ACTN4-210ENST00000588618 CTSEP14091 401 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 HOXD12P35452 270 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 PI4KAP42356 2102 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 KPNA2P52292 529 aaKnown RBP22.2■■□□□ 1.14
ACTN4-210ENST00000588618 NXPH1P58417 271 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 SEPT7Q16181 437 aaKnown RBP22.2■■□□□ 1.14
ACTN4-210ENST00000588618 LPAL2Q16609 132 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 TSNAXIP1Q2TAA8 658 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 LCA5Q86VQ0 697 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 MYO1HQ8N1T3 1032 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 NXNL1Q96CM4 212 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 GPR78Q96P69 363 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 COG4Q9H9E3 785 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 KLC4Q9NSK0 619 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 TMEM74BQ9NUR3 256 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 MKS1Q9NXB0 559 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 SLC23A2Q9UGH3 650 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 TSR3Q9UJK0 312 aaKnown RBP22.2■■□□□ 1.14
ACTN4-210ENST00000588618 CDYLQ9Y232 598 aa22.2■■□□□ 1.14
ACTN4-210ENST00000588618 KLHL2O95198 593 aa22.19■■□□□ 1.14
ACTN4-210ENST00000588618 RPA3P35244 121 aaPredicted RBP22.19■■□□□ 1.14
ACTN4-210ENST00000588618 NFE2L1Q14494 772 aa22.19■■□□□ 1.14
ACTN4-210ENST00000588618 GBX1Q14549 363 aa22.19■■□□□ 1.14
ACTN4-210ENST00000588618 ZNF542PQ5EBM4 170 aa22.19■■□□□ 1.14
ACTN4-210ENST00000588618 ACSBG2Q5FVE4 666 aa22.19■■□□□ 1.14
ACTN4-210ENST00000588618 VRK3Q8IV63 474 aa22.19■■□□□ 1.14
ACTN4-210ENST00000588618 EEF1AKMT1Q8WVE0 214 aa22.19■■□□□ 1.14
ACTN4-210ENST00000588618 SSU72Q9NP77 194 aaKnown RBP22.19■■□□□ 1.14
ACTN4-210ENST00000588618 TRNAU1APQ9NX07 287 aaKnown RBP22.19■■□□□ 1.14
ACTN4-210ENST00000588618 IKZF3Q9UKT9 509 aa22.19■■□□□ 1.14
ACTN4-210ENST00000588618 EMCNQ9ULC0 261 aa22.19■■□□□ 1.14
ACTN4-210ENST00000588618 SMG5Q9UPR3 1016 aaKnown RBP22.19■■□□□ 1.14
ACTN4-210ENST00000588618 R4GN57 208 aa22.19■■□□□ 1.14
ACTN4-210ENST00000588618 CACNA1EQ15878 2313 aa22.19■■□□□ 1.14
ACTN4-210ENST00000588618 TMEM120BA0PK00 339 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 H3BM21 787 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 EIF3FO00303 357 aaPredicted RBP22.18■■□□□ 1.14
ACTN4-210ENST00000588618 GSTA1P08263 222 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 CRHR1P34998 444 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 ILF3Q12906 894 aaKnown RBP eCLIP22.18■■□□□ 1.14
ACTN4-210ENST00000588618 EIF2B5Q13144 721 aaKnown RBP22.18■■□□□ 1.14
ACTN4-210ENST00000588618 C16orf46Q6P387 395 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 PHACTR4Q8IZ21 702 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 CEP76Q8TAP6 659 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 SELENOSQ9BQE4 189 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 NMRAL1Q9HBL8 299 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 TMEM216Q9P0N5 145 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 SLC17A7Q9P2U7 560 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 APOBEC3BQ9UH17 382 aaKnown RBP22.18■■□□□ 1.14
ACTN4-210ENST00000588618 GRID1Q9ULK0 1009 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 RUVBL2Q9Y230 463 aaKnown RBP22.18■■□□□ 1.14
ACTN4-210ENST00000588618 KCNK6Q9Y257 313 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 ST14Q9Y5Y6 855 aa22.18■■□□□ 1.14
ACTN4-210ENST00000588618 A0A1B0GVT2 93 aa22.17■■□□□ 1.14
ACTN4-210ENST00000588618 PRPF4O43172 522 aaKnown RBP eCLIP22.17■■□□□ 1.141e-7■■■■□ 24.3
ACTN4-210ENST00000588618 GPC4O75487 556 aa22.17■■□□□ 1.14
ACTN4-210ENST00000588618 CFIP05156 583 aa22.17■■□□□ 1.14
ACTN4-210ENST00000588618 JUNDP17535 347 aa22.17■■□□□ 1.14
ACTN4-210ENST00000588618 NR1D1P20393 614 aa22.17■■□□□ 1.14
ACTN4-210ENST00000588618 PREPP48147 710 aa22.17■■□□□ 1.14
ACTN4-210ENST00000588618 ATP6V0D1P61421 351 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms