RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 SLC9B2Q86UD5 537 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 ZC3HC1Q86WB0 502 aaKnown RBP14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 CNPY4Q8N129 248 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 KRT222Q8N1A0 295 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 ZBTB2Q8N680 514 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 KYQ8NBH2 561 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 NAT6Q93015 286 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 CXorf40BQ96DE9 158 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 TSPAN17Q96FV3 270 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 ATXN7L3BQ96GX2 97 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 VPS39Q96JC1 886 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 ELMO2Q96JJ3 720 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 TXLNGYQ9BZA5 131 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 PRDM8Q9NQV8 689 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 SMYD2Q9NRG4 433 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 TRMT6Q9UJA5 497 aaKnown RBP14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 BTBD3Q9Y2F9 522 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 ST14Q9Y5Y6 855 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 HEBP2Q9Y5Z4 205 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 PSAT1Q9Y617 370 aa14.3□□□□□ -0.12
SCAMP4-209ENST00000585335 FRYLO94915 3013 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 CABIN1Q9Y6J0 2220 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 MYO15AQ9UKN7 3530 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 RIF1Q5UIP0 2472 aaKnown RBP14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 PRR19A6NJB7 356 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 CXorf49A8MYA2 514 aaPredicted RBP14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 F7P08709 466 aaPredicted RBP14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 GIMD1P0DJR0 217 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 CSRP1P21291 193 aaKnown RBP14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 GABRB3P28472 473 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 CCR7P32248 378 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 MSH2P43246 934 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 PDAP1Q13442 181 aaKnown RBP14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 KRT33BQ14525 404 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 BRD3Q15059 726 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 UAP1Q16222 522 aaPredicted RBP14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 ZNF549Q6P9A3 640 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 IYDQ6PHW0 289 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 ABRAXAS1Q6UWZ7 409 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 LKAAEAR1Q8TD35 194 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 AENQ8WTP8 325 aaKnown RBP14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 INPP5DQ92835 1189 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 CAVIN3Q969G5 261 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 SH3KBP1Q96B97 665 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 APOLD1Q96LR9 279 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 NDNQ99608 321 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 RBBP8Q99708 897 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 RTKNQ9BST9 563 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 WWP1Q9H0M0 922 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 PADI4Q9UM07 663 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 PSMD13Q9UNM6 376 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 VWA7Q9Y334 891 aa14.29□□□□□ -0.12
SCAMP4-209ENST00000585335 FAM95CA0A1B0GW59 222 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 SLC5A10A0PJK1 596 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 A6NCN8 305 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 RHPN2P1A8MT19 583 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 TNFSF14O43557 240 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 ZFC3H1O60293 1989 aaKnown RBP14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 PIAS1O75925 651 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 VIPP01282 170 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 RPN2P04844 631 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 CKMT2P17540 419 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 COL5A1P20908 1838 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 CD9P21926 228 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 ATP5DP30049 168 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 ABCG1P45844 678 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 MAPK9P45984 424 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 PREPP48147 710 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 RGS4P49798 205 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 SERPINB9P50453 376 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 LIMK2P53671 638 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 POU4F1Q01851 419 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 SLC29A2Q14542 456 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 EFTUD2Q15029 972 aaKnown RBP eCLIP14.28□□□□□ -0.122e-6■■■■□ 20.4
SCAMP4-209ENST00000585335 RSPO4Q2I0M5 234 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 PROX2Q3B8N5 592 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 ZNF658BQ4V348 819 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 HECTD2Q5U5R9 776 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 LRRC8EQ6NSJ5 796 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 PIP4P1Q86T03 277 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 PDZD3Q86UT5 571 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 RBM12BQ8IXT5 1001 aaKnown RBP14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 SLC35F3Q8IY50 421 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 SLC22A15Q8IZD6 547 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 NAGSQ8N159 534 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 SFRP1Q8N474 314 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 GPR156Q8NFN8 814 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 UHMK1Q8TAS1 419 aaKnown RBP14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 SLC37A2Q8TED4 501 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 SKA2Q8WVK7 121 aaPredicted RBP14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 FAM136AQ96C01 138 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 MRRFQ96E11 262 aaKnown RBP14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 C12orf66Q96MD2 445 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 FOPNLQ96NB1 174 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 GPR21Q99679 349 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 PPCSQ9HAB8 311 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 LATS2Q9NRM7 1088 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 POT1Q9NUX5 634 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 PIKFYVEQ9Y2I7 2098 aa14.28□□□□□ -0.12
SCAMP4-209ENST00000585335 DHRS7Q9Y394 339 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms