RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 MROH6A6NGR9 719 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 CAPN8A6NHC0 703 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 CTSLP07711 333 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 ALPPL2P10696 532 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 PEX2P28328 305 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 RGS4P49798 205 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 PTSQ03393 145 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 ZNF678Q5SXM1 525 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 EGFLAMQ63HQ2 1017 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 SAMD11Q96NU1 681 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 ELOVL2Q9NXB9 296 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 DLGAP2Q9P1A6 1054 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 OPTCQ9UBM4 332 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 SUN2Q9UH99 717 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 MID2Q9UJV3 735 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 APPL1Q9UKG1 709 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 SIP14410 1827 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 A0A087X1B8 175 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 CLIC3O95833 236 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 SPAM1P38567 509 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 ZNF135P52742 658 aaPredicted RBP10.12□□□□□ -0.79
RFFL-212ENST00000584655 CLDN2P57739 230 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 CNTN1Q12860 1018 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 IL23RQ5VWK5 629 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 SLC2A7Q6PXP3 512 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 SPPL2CQ8IUH8 684 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 ARHGAP24Q8N264 748 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 PARP8Q8N3A8 854 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 BPIFB1Q8TDL5 484 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 C2orf15Q8WU43 125 aaKnown RBP10.12□□□□□ -0.79
RFFL-212ENST00000584655 SELENOMQ8WWX9 145 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 HEPHQ9BQS7 1158 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 CRISPLD2Q9H0B8 497 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 ERVW-1Q9UQF0 538 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 C15orf41Q9Y2V0 281 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 CACNA1CQ13936 2221 aa10.12□□□□□ -0.79
RFFL-212ENST00000584655 TIPRLO75663 272 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 CCR7P32248 378 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 ALDH9A1P49189 494 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 MS4A2Q01362 244 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 GTDC1Q4AE62 458 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 AFMIDQ63HM1 303 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 EPGNQ6UW88 154 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 TIFABQ6ZNK6 161 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 GPRIN3Q6ZVF9 776 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 LRRC49Q8IUZ0 686 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 PHACTR4Q8IZ21 702 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 TMEM151AQ8N4L1 468 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 RAB3IL1Q8TBN0 382 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 TMEM159Q96B96 161 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 PTCD3Q96EY7 689 aaKnown RBP10.11□□□□□ -0.79
RFFL-212ENST00000584655 PLA2G2FQ9BZM2 168 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 RC3H2Q9HBD1 1191 aaKnown RBP10.11□□□□□ -0.79
RFFL-212ENST00000584655 SPATS2LQ9NUQ6 558 aaKnown RBP10.11□□□□□ -0.79
RFFL-212ENST00000584655 PLEKHM1Q9Y4G2 1056 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 TRPM6Q9BX84 2022 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 TDRD6O60522 2096 aaKnown RBP10.11□□□□□ -0.79
RFFL-212ENST00000584655 THSD7BQ9C0I4 1608 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 WDFY3Q8IZQ1 3526 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 IGLON5A6NGN9 336 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 AP3B1O00203 1094 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 MID1O15344 667 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 RECQL5O94762 991 aaPredicted RBP10.11□□□□□ -0.79
RFFL-212ENST00000584655 PSMG1O95456 288 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 POP4O95707 220 aaKnown RBP10.11□□□□□ -0.79
RFFL-212ENST00000584655 C1QCP02747 245 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 ACAP2Q15057 778 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 PCBP2Q15366 365 aaKnown RBP eCLIP10.11□□□□□ -0.792e-11■□□□□ 9.2
RFFL-212ENST00000584655 PTCHD3Q3KNS1 767 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 ARTNQ5T4W7 220 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 NPAS3Q8IXF0 933 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 CNBD2Q96M20 576 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 CCDC106Q9BWC9 280 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 GSTO2Q9H4Y5 243 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 ELOVL6Q9H5J4 265 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 IL37Q9NZH6 218 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 C5AR2Q9P296 337 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 LIMD1Q9UGP4 676 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 ASF1AQ9Y294 204 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 MYO16Q9Y6X6 1858 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 H0Y858 1186 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 H0Y8X5 98 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 PDLIM1O00151 329 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 ACP5P13686 325 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 MTHFD2P13995 350 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 PPARGP37231 505 aaPredicted RBP10.11□□□□□ -0.79
RFFL-212ENST00000584655 ERVPABLB-1P60509 514 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 NFE2L1Q14494 772 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 ABRAXAS2Q15018 415 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 INSCQ1MX18 579 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 BNC2Q6ZN30 1099 aaPredicted RBP10.11□□□□□ -0.79
RFFL-212ENST00000584655 TMPRSS11BQ86T26 416 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 MYRFLQ96LU7 910 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 LRGUKQ96M69 825 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 TRIB3Q96RU7 358 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 RNPEPL1Q9HAU8 725 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 HEBP1Q9NRV9 189 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 PKD2L2Q9NZM6 624 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 SH3BP4Q9P0V3 963 aa10.11□□□□□ -0.79
RFFL-212ENST00000584655 MED16Q9Y2X0 877 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms