RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 DBNLQ9UJU6 430 aaKnown RBP3□□□□□ -1.93
SMCHD1-206ENST00000581631 MRPS28Q9Y2Q9 187 aaKnown RBP3□□□□□ -1.93
SMCHD1-206ENST00000581631 YIPF1Q9Y548 306 aa3□□□□□ -1.93
SMCHD1-206ENST00000581631 MEIOCA2RUB1 952 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 OR2M5A3KFT3 312 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 C15orf62A8K5M9 175 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 A8MU10 97 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 SH2B2O14492 632 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 CLIC2O15247 247 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 EPB41L2O43491 1005 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 GCNT3O95395 438 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 DDX58O95786 925 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 LAMP2P13473 410 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 SELLP14151 372 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 GNAZP19086 355 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 ARL3P36405 182 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 MAP2K2P36507 400 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 NR2C2P49116 596 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 CAMPP49913 170 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 PPP2R2BQ00005 443 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 IKQ13123 557 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 PCGF3Q3KNV8 242 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 ZDHHC20Q5W0Z9 365 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 KIAA0930Q6ICG6 404 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 SARM1Q6SZW1 724 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 CFAP77Q6ZQR2 320 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 ZNF534Q76KX8 674 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 GALNT13Q8IUC8 556 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 POMGNT1Q8WZA1 660 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 SEMA4DQ92854 862 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 OR2A14Q96R47 310 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 KAT14Q9H8E8 782 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 ZBTB20Q9HC78 741 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 MBNL1Q9NR56 388 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 DNAJB4Q9UDY4 337 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 TP53TG3Q9ULZ0 132 aa2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 KLF2Q9Y5W3 355 aaPredicted RBP2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 TDRD9Q8NDG6 1382 aaKnown RBP2.99□□□□□ -1.93
SMCHD1-206ENST00000581631 ZNF646O15015 1829 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 FLT1P17948 1338 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 TEX13DA0A0J9YY54 714 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 FRMD3A2A2Y4 597 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 TMEM8BA6NDV4 472 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 A8MZ25 164 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 MYO1GB0I1T2 1018 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 E9PQ18 207 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 SLC22A2O15244 555 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 HS6ST1O60243 411 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 TMCC2O75069 709 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 SRPRAP08240 638 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 KRTAP1-4P0C5Y4 121 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 ACTN1P12814 892 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 EPHA2P29317 976 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 TLX1P31314 330 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 SLC8A3P57103 927 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 SETQ01105 290 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 ADAMTSL4-AS1Q5T5F5 129 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 JADE1Q6IE81 842 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 TMEM154Q6P9G4 183 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 TPRG1Q6ZUI0 275 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 TEX11Q8IYF3 940 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 FBXL16Q8N461 479 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 WDTC1Q8N5D0 677 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 SMPDL3BQ92485 455 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 FOXN4Q96NZ1 517 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 DDOQ99489 341 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 SYT11Q9BT88 431 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 HGH1Q9BTY7 390 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 FTOQ9C0B1 505 aaKnown RBP eCLIP2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 PAG1Q9NWQ8 432 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 TRMT1Q9NXH9 659 aaKnown RBP2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 CSAG2Q9Y5P2 127 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 SESN1Q9Y6P5 492 aa2.98□□□□□ -1.93
SMCHD1-206ENST00000581631 A0A087X0M5 115 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 A0A1B0GX30 115 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 PLOD2O00469 737 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 USO1O60763 962 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 TPPPO94811 219 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 OR2C1O95371 312 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 NADKO95544 446 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 SCGB1D1O95968 90 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 CLTBP09497 229 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 IGHV4-38-2P0DP08 117 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 CKMT2P17540 419 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 GABRB1P18505 474 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 TNFAIP3P21580 790 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 CBLP22681 906 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 MAPK4P31152 587 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 CDH8P55286 799 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 PRAMEP78395 509 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 MAMLD1Q13495 774 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 KIAA1644Q3SXP7 199 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 RARS2Q5T160 578 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 FAAH2Q6GMR7 532 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 MFSD6Q6ZSS7 791 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 RSRC2Q7L4I2 434 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 TICAM1Q8IUC6 712 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 CRYBG2Q8N1P7 616 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 TMTC2Q8N394 836 aa2.97□□□□□ -1.93
SMCHD1-206ENST00000581631 NGEFQ8N5V2 710 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms