RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 GPR143P51810 404 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 ILF3Q12906 894 aaKnown RBP eCLIP4.27□□□□□ -1.73
NF1-220ENST00000581113 PPP2R5CQ13362 524 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 GTF2H2Q13888 395 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 STXBP5Q5T5C0 1151 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 TMEM198Q66K66 360 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 GTF2H2CQ6P1K8 395 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 CFAP77Q6ZQR2 320 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 C9orf139Q6ZV77 190 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 ADGRF2Q8IZF7 708 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 EMC1Q8N766 993 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 MOAP1Q96BY2 351 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 PGAM5Q96HS1 289 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 TREX2Q9BQ50 279 aaPredicted RBP4.27□□□□□ -1.73
NF1-220ENST00000581113 SRSF8Q9BRL6 282 aaKnown RBP4.27□□□□□ -1.73
NF1-220ENST00000581113 TMEM39BQ9GZU3 492 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 LRMDAQ9H2I8 198 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 ANKEF1Q9NU02 776 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 ABCF3Q9NUQ8 709 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 KCNG2Q9UJ96 466 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 ZNF215Q9UL58 517 aaPredicted RBP4.27□□□□□ -1.73
NF1-220ENST00000581113 TMCC3Q9ULS5 477 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 NENFQ9UMX5 172 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 CCDC144AA2RUR9 1427 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 PTCH1Q13635 1447 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 ADGRL3Q9HAR2 1447 aa4.27□□□□□ -1.73
NF1-220ENST00000581113 XRN1Q8IZH2 1706 aaKnown RBP4.27□□□□□ -1.73
NF1-220ENST00000581113 COL16A1Q07092 1604 aaPredicted RBP4.27□□□□□ -1.73
NF1-220ENST00000581113 AHDC1Q5TGY3 1603 aaPredicted RBP4.27□□□□□ -1.73
NF1-220ENST00000581113 ASXL1Q8IXJ9 1541 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 ASPDHA6ND91 283 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 ZNHIT1O43257 154 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 WDR1O75083 606 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 HSP90AB1P08238 724 aaKnown RBP4.26□□□□□ -1.73
NF1-220ENST00000581113 CETPP11597 493 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 SNX16P57768 344 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 EEF1A1P68104 462 aaKnown RBP4.26□□□□□ -1.73
NF1-220ENST00000581113 PLIN5Q00G26 463 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 EEF1A1P5Q5VTE0 462 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 OR7E24Q6IFN5 339 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 LCN10Q6JVE6 187 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 FOXL2NBQ6ZUU3 175 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 ZNF771Q7L3S4 317 aaPredicted RBP4.26□□□□□ -1.73
NF1-220ENST00000581113 DSG4Q86SJ6 1040 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 MUC20Q8N307 709 aaPredicted RBP4.26□□□□□ -1.73
NF1-220ENST00000581113 ARL10Q8N8L6 244 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 OR13A1Q8NGR1 328 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 GSDMBQ8TAX9 411 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 TRPC4APQ8TEL6 797 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 SNX21Q969T3 373 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 LRRC59Q96AG4 307 aaKnown RBP4.26□□□□□ -1.73
NF1-220ENST00000581113 ZMAT2Q96NC0 199 aaKnown RBP4.26□□□□□ -1.73
NF1-220ENST00000581113 ZCCHC17Q9NP64 241 aaKnown RBP4.26□□□□□ -1.73
NF1-220ENST00000581113 KLHL1Q9NR64 748 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 CMAHPQ9Y471 501 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 LRP6O75581 1613 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 C1orf167Q5SNV9 1468 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 ANKRD30BQ9BXX2 1392 aa4.26□□□□□ -1.73
NF1-220ENST00000581113 SPATA31E1Q6ZUB1 1445 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 PRAG1Q86YV5 1406 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 SETD5Q9C0A6 1442 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 ANKRD18BA2A2Z9 1011 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 PRR23D1E9PI22 279 aaPredicted RBP4.25□□□□□ -1.73
NF1-220ENST00000581113 C16orf97H3BN30 126 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 SMAD9O15198 467 aaKnown RBP4.25□□□□□ -1.73
NF1-220ENST00000581113 XPNPEP2O43895 674 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 KRT36O76013 467 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 ZNF432O94892 652 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 FAM106CPP0CH98 169 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 PRR23D2P0DMB1 279 aaPredicted RBP4.25□□□□□ -1.73
NF1-220ENST00000581113 PON1P27169 355 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 FMO5P49326 533 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 DLX5P56178 289 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 MC1RQ01726 317 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 ROR1Q01973 937 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 IRF3Q14653 427 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 ZRSR1Q15695 479 aaKnown RBP4.25□□□□□ -1.73
NF1-220ENST00000581113 FAM205BPQ63HN1 556 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 ZNF772Q68DY9 489 aaPredicted RBP4.25□□□□□ -1.73
NF1-220ENST00000581113 FAM171BQ6P995 826 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 ZNF449Q6P9G9 518 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 ZNF704Q6ZNC4 412 aaPredicted RBP4.25□□□□□ -1.73
NF1-220ENST00000581113 ATG9AQ7Z3C6 839 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 RPAINQ86UA6 219 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 LMNTD2Q8IXW0 634 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 PM20D2Q8IYS1 436 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 ATP6V1E2Q96A05 226 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 TBC1D31Q96DN5 1066 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 EPYCQ99645 322 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 NEURL2Q9BR09 285 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 POLR3CQ9BUI4 534 aaPredicted RBP4.25□□□□□ -1.73
NF1-220ENST00000581113 MAK16Q9BXY0 300 aaKnown RBP4.25□□□□□ -1.73
NF1-220ENST00000581113 TCF7L2Q9NQB0 619 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 DBNLQ9UJU6 430 aaKnown RBP4.25□□□□□ -1.73
NF1-220ENST00000581113 B3GALT5Q9Y2C3 310 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 SNX5Q9Y5X3 404 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 KIF1BO60333 1816 aa4.25□□□□□ -1.73
NF1-220ENST00000581113 OR5K3A6NET4 321 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 C19orf81C9J6K1 198 aa4.24□□□□□ -1.73
NF1-220ENST00000581113 TMEM178BH3BS89 294 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms