RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 KCNK6Q9Y257 313 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 PLEKHM1Q9Y4G2 1056 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 GOLGA4Q13439 2230 aaKnown RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 COL5A1P20908 1838 aaPredicted RBP15.24■□□□□ 0.03
SS18-216ENST00000580751 TLDC2A0PJX2 215 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 MGAT4DA6NG13 374 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 TRIM38O00635 465 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 SIGLEC6O43699 453 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 SGTAO43765 313 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 OR1I1O60431 355 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 POP7O75817 140 aaKnown RBP15.24■□□□□ 0.03
SS18-216ENST00000580751 SYF2O95926 243 aaKnown RBP15.24■□□□□ 0.03
SS18-216ENST00000580751 RPS3P23396 243 aaKnown RBP eCLIP15.24■□□□□ 0.03
SS18-216ENST00000580751 SLC1A2P43004 574 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 ADARP55265 1226 aaKnown RBP15.24■□□□□ 0.03
SS18-216ENST00000580751 TIFABQ6ZNK6 161 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 CCDC91Q7Z6B0 441 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 UNC5BQ8IZJ1 945 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 BEND7Q8N7W2 519 aaPredicted RBP15.24■□□□□ 0.03
SS18-216ENST00000580751 ARL10Q8N8L6 244 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 PNPLA1Q8N8W4 532 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 FAM181AQ8N9Y4 354 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 BAHD1Q8TBE0 780 aaPredicted RBP15.24■□□□□ 0.03
SS18-216ENST00000580751 LPGAT1Q92604 370 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 DPEP2Q9H4A9 486 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 OSGEPL1Q9H4B0 414 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 RHOJQ9H4E5 214 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 IARS2Q9NSE4 1012 aaKnown RBP15.24■□□□□ 0.03
SS18-216ENST00000580751 SLC23A2Q9UGH3 650 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 GNPTGQ9UJJ9 305 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 DNAJC16Q9Y2G8 782 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 PCDHB1Q9Y5F3 818 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 ST14Q9Y5Y6 855 aa15.24■□□□□ 0.03
SS18-216ENST00000580751 C17orf113A0A1B0GUU1 675 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 UBA6A0AVT1 1052 aaPredicted RBP15.23■□□□□ 0.03
SS18-216ENST00000580751 B4DGG1 531 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 H3BMM5 538 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 TM4SF5O14894 197 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 CBFA2T3O75081 653 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 ESR1P03372 595 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 SLC2A4P14672 509 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 IDSP22304 550 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 PBLDP30039 288 aaPredicted RBP15.23■□□□□ 0.03
SS18-216ENST00000580751 RPIAP49247 311 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 LIMK2P53671 638 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 CTBP1Q13363 440 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 PROX2Q3B8N5 592 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 STRA8Q7Z7C7 330 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 DENND6AQ8IWF6 608 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 OR2L2Q8NH16 312 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 HM13Q8TCT9 377 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 ACMSDQ8TDX5 336 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 NAT14Q8WUY8 206 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 ALKBH8Q96BT7 664 aaKnown RBP15.23■□□□□ 0.03
SS18-216ENST00000580751 TLCD1Q96CP7 247 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 CNDP2Q96KP4 475 aaKnown RBP15.23■□□□□ 0.03
SS18-216ENST00000580751 RBBP8Q99708 897 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 CCM2Q9BSQ5 444 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 P2RY12Q9H244 342 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 SSU72Q9NP77 194 aaKnown RBP15.23■□□□□ 0.03
SS18-216ENST00000580751 COMMD10Q9Y6G5 202 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 PRSS21Q9Y6M0 314 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 ZFC3H1O60293 1989 aaKnown RBP15.23■□□□□ 0.03
SS18-216ENST00000580751 PIKFYVEQ9Y2I7 2098 aa15.23■□□□□ 0.03
SS18-216ENST00000580751 PRR19A6NJB7 356 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 LDOC1O95751 146 aaPredicted RBP15.22■□□□□ 0.03
SS18-216ENST00000580751 S1PR4O95977 384 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 SLCO1A2P46721 670 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 CD151P48509 253 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 DUSP3P51452 185 aaPredicted RBP15.22■□□□□ 0.03
SS18-216ENST00000580751 DAB2P98082 770 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 EFTUD2Q15029 972 aaKnown RBP eCLIP15.22■□□□□ 0.035e-13■■■■■ 88.9
SS18-216ENST00000580751 PTRHD1Q6GMV3 140 aaKnown RBP15.22■□□□□ 0.03
SS18-216ENST00000580751 OGFOD3Q6PK18 319 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 DEFB124Q8NES8 71 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 ZDHHC1Q8WTX9 485 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 ISL2Q96A47 359 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 APOLD1Q96LR9 279 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 CAMK1GQ96NX5 476 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 PANX3Q96QZ0 392 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 CCDC68Q9H2F9 335 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 SPATS2LQ9NUQ6 558 aaKnown RBP15.22■□□□□ 0.03
SS18-216ENST00000580751 DLL3Q9NYJ7 618 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 TBC1D29Q9UFV1 150 aa15.22■□□□□ 0.03
SS18-216ENST00000580751 A6NCN8 305 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 OR5K4A6NMS3 321 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 PDZK1P1A8MUH7 402 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 TNFSF14O43557 240 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 SNX2O60749 519 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 AHSGP02765 367 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 ITGA2BP08514 1039 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 F3P13726 295 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 KRT15P19012 456 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 CD9P21926 228 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 NFE2L1Q14494 772 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 NR0B2Q15466 257 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 AGAP9Q5VTM2 703 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 METRNLQ641Q3 311 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 WASH2PQ6VEQ5 465 aa15.21■□□□□ 0.03
SS18-216ENST00000580751 GLRX5Q86SX6 157 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms