RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 AKTIPQ9H8T0 292 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 ACSS2Q9NR19 701 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 LMCD1Q9NZU5 365 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 THAP10Q9P2Z0 257 aaPredicted RBP10.94□□□□□ -0.66
SKA2-204ENST00000578519 EPS15L1Q9UBC2 864 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 PPM1HQ9ULR3 514 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 DNAJC15Q9Y5T4 150 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 PRSS21Q9Y6M0 314 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 ANKRD36A6QL64 1941 aa10.94□□□□□ -0.66
SKA2-204ENST00000578519 A0A0U1RQS6 177 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 E2F3O00716 465 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 PSMG1O95456 288 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 MATN4O95460 622 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 KRT6AP02538 564 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 CATP04040 527 aaKnown RBP10.93□□□□□ -0.66
SKA2-204ENST00000578519 KRT6BP04259 564 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 TSPAN8P19075 237 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 ITGAXP20702 1163 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 GCKP35557 465 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 TNFRSF4P43489 277 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 SLC6A11P48066 632 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 KRT6CP48668 564 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 HK3P52790 923 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 ACTR3P61158 418 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 ZNF33BQ06732 778 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 ZNF234Q14588 700 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 KPNB1Q14974 876 aaKnown RBP10.93□□□□□ -0.66
SKA2-204ENST00000578519 SPATS1Q496A3 300 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 ATP6AP1LQ52LC2 224 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 COQ5Q5HYK3 327 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 C9orf64Q5T6V5 341 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 TANGO2Q6ICL3 276 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 PGM2L1Q6PCE3 622 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 SBSNQ6UWP8 590 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 Q6ZVL8 140 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 ERN2Q76MJ5 926 aaKnown RBP10.93□□□□□ -0.66
SKA2-204ENST00000578519 GOLGA7Q7Z5G4 137 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 HSD11B1LQ7Z5J1 315 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 SPRED2Q7Z698 418 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 DSELQ8IZU8 1212 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 CSGALNACT1Q8TDX6 532 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 RSPRY1Q96DX4 576 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 LRRC3BQ96PB8 259 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 HOPXQ9BPY8 73 aaPredicted RBP10.93□□□□□ -0.66
SKA2-204ENST00000578519 CCM2Q9BSQ5 444 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 NTMT1Q9BV86 223 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 TRMT61BQ9BVS5 477 aaKnown RBP10.93□□□□□ -0.66
SKA2-204ENST00000578519 HDAC8Q9BY41 377 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 SLC32A1Q9H598 525 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 NOL11Q9H8H0 719 aaKnown RBP10.93□□□□□ -0.66
SKA2-204ENST00000578519 IPPKQ9H8X2 491 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 FBRSQ9HAH7 460 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 ARL15Q9NXU5 204 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 TRPS1Q9UHF7 1281 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 EIF2B4Q9UI10 523 aaKnown RBP10.93□□□□□ -0.66
SKA2-204ENST00000578519 CDH22Q9UJ99 828 aa10.93□□□□□ -0.66
SKA2-204ENST00000578519 MTF2Q9Y483 593 aaPredicted RBP10.93□□□□□ -0.66
SKA2-204ENST00000578519 A0A088AWK7 358 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 KLHL33A6NCF5 533 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 A8MUI8 341 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 PRRT4C9JH25 899 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 ANGPT2O15123 496 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 TRIM24O15164 1050 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 VEGFDO43915 354 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 NRP2O60462 931 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 SYNCRIPO60506 623 aaKnown RBP10.92□□□□□ -0.66
SKA2-204ENST00000578519 PEX11AO75192 247 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 KAT7O95251 611 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 GUCA1CO95843 209 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 CTSLP07711 333 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 LINC00032P0C843 101 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 ME2P23368 584 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 CCR7P32248 378 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 GGT5P36269 586 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 PBX2P40425 430 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 ETV3P41162 512 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 GPR1P46091 355 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 MTTPP55157 894 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 KCNK10P57789 538 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 ERVK-8P63133 956 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 SLC34A1Q06495 639 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 HSPA14Q0VDF9 509 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 TMEM115Q12893 351 aaPredicted RBP10.92□□□□□ -0.66
SKA2-204ENST00000578519 GBX1Q14549 363 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 PPP1R3AQ16821 1122 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 TCEAL5Q5H9L2 206 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 TMEM198Q66K66 360 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 ZFP1Q6P2D0 407 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 VITQ6UXI7 678 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 PARS2Q7L3T8 475 aaKnown RBP10.92□□□□□ -0.66
SKA2-204ENST00000578519 SYVN1Q86TM6 617 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 C12orf40Q86WS4 652 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 ASB11Q8WXH4 323 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 GLMNQ92990 594 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 RHBDF1Q96CC6 855 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 RCN3Q96D15 328 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 NUS1Q96E22 293 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 DTD2Q96FN9 168 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 COQ10AQ96MF6 247 aa10.92□□□□□ -0.66
SKA2-204ENST00000578519 NECTIN4Q96NY8 510 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms