RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 FAM160A2Q8N612 972 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-202ENST00000578430 OR56A4Q8NGH8 313 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 TMEM159Q96B96 161 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 MAGEB18Q96M61 343 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 WDR92Q96MX6 357 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 TIMM29Q9BSF4 260 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 DUSP15Q9H1R2 295 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-202ENST00000578430 C12orf65Q9H3J6 166 aaKnown RBP13.18□□□□□ -0.3
SRSF1-202ENST00000578430 EBF2Q9HAK2 575 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 XPR1Q9UBH6 696 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 MBD1Q9UIS9 605 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-202ENST00000578430 FBXO4Q9UKT5 387 aa13.18□□□□□ -0.3
SRSF1-202ENST00000578430 BTN3A1O00481 513 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 SLC16A5O15375 505 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 ZBTB14O43829 449 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 C8GP07360 202 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 TPBGLP0DKB5 382 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 NEFHP12036 1026 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 ATP5F1P24539 256 aaPredicted RBP13.17□□□□□ -0.3
SRSF1-202ENST00000578430 GMPRP36959 345 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 GLRBP48167 497 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 CLDN2P57739 230 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 GUCY1A3Q02108 690 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 DMPKQ09013 629 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 HSPA14Q0VDF9 509 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 SP140Q13342 867 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 BOP1Q14137 746 aaKnown RBP13.17□□□□□ -0.3
SRSF1-202ENST00000578430 DOK6Q6PKX4 331 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 CYHR1Q6ZMK1 362 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 C11orf96Q7Z7L8 435 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 GALNT13Q8IUC8 556 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 SLC22A9Q8IVM8 553 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 ZNF547Q8IVP9 402 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 SPATA6LQ8N4H0 392 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 BEND7Q8N7W2 519 aaPredicted RBP13.17□□□□□ -0.3
SRSF1-202ENST00000578430 FRMD1Q8N878 549 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 DTWD2Q8NBA8 298 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 MYOCQ99972 504 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 ORAI3Q9BRQ5 295 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 DPEP2Q9H4A9 486 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 ALG9Q9H6U8 611 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 MLXIPLQ9NP71 852 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 SIRPGQ9P1W8 387 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 CDYLQ9Y232 598 aa13.17□□□□□ -0.3
SRSF1-202ENST00000578430 CFAP54Q96N23 3096 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 DOCK9Q9BZ29 2069 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 TMEM202A6NGA9 273 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 MEI4A8MW99 385 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 G3V2L1 256 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 TK2O00142 265 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 KLF11O14901 512 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 SHOX2O60902 331 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-202ENST00000578430 SMIM24O75264 130 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 ENO2P09104 434 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-202ENST00000578430 DNAJB13P59910 316 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 NAA20P61599 178 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 GNGT1P63211 74 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 RACK1P63244 317 aaKnown RBP13.16□□□□□ -0.3
SRSF1-202ENST00000578430 IRX4P78413 519 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 NFKB2Q00653 900 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 PCLAFQ15004 111 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 PYCR3Q53H96 274 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 CDKL4Q5MAI5 379 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 WDR45BQ5MNZ6 344 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 ATG16L1Q676U5 607 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 CRTC3Q6UUV7 619 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 Q6ZSR6 202 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 LPCAT2Q7L5N7 544 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 GPSM1Q86YR5 675 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 SLC22A15Q8IZD6 547 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 FBXL6Q8N531 539 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 MFSD2AQ8NA29 543 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 LRRC8CQ8TDW0 803 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 NAT14Q8WUY8 206 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 DNASE2BQ8WZ79 361 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 SNX19Q92543 992 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 PTERQ96BW5 349 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 ATOH8Q96SQ7 321 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 COG4Q9H9E3 785 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 RDH14Q9HBH5 336 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 GPR27Q9NS67 375 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 OXSMQ9NWU1 459 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 CPSF2Q9P2I0 782 aaKnown RBP13.16□□□□□ -0.3
SRSF1-202ENST00000578430 ZNHIT2Q9UHR6 403 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 ACSL5Q9ULC5 683 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 RNF112Q9ULX5 631 aa13.16□□□□□ -0.3
SRSF1-202ENST00000578430 ZDBF2Q9HCK1 2354 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 PRSS38A1L453 326 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 H3BM21 787 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 CDC7O00311 574 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 TRIM13O60858 407 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 SBK3P0C264 359 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 GRK2P25098 689 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 PBLDP30039 288 aaPredicted RBP13.15□□□□□ -0.3
SRSF1-202ENST00000578430 ALDH3A1P30838 453 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 LSP1P33241 339 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 FNTBP49356 437 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 CLCNKAP51800 687 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 DMWDQ09019 674 aa13.15□□□□□ -0.3
SRSF1-202ENST00000578430 TCF15Q12870 199 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms