RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ZBTB44Q8NCP5 570 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 FAM45AQ8TCE6 357 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 ACMSDQ8TDX5 336 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 GAB3Q8WWW8 586 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 KLK6Q92876 244 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 FUBP1Q96AE4 644 aaKnown RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 DCUN1D1Q96GG9 259 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 LINC00615Q96LM1 132 aaPredicted RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 APOOQ9BUR5 198 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 CLPBQ9H078 707 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 CCDC68Q9H2F9 335 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 WDR26Q9H7D7 661 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 RMI1Q9H9A7 625 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 POPDC3Q9HBV1 291 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 MED4Q9NPJ6 270 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 PHPT1Q9NRX4 125 aaPredicted RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 GPR27Q9NS67 375 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 CRYL1Q9Y2S2 319 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 MED16Q9Y2X0 877 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 MTO1Q9Y2Z2 717 aaKnown RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 ACTL7BQ9Y614 415 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 MYO15AQ9UKN7 3530 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 ATG2BQ96BY7 2078 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 VPS13AQ96RL7 3174 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 C17orf113A0A1B0GUU1 675 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 POM121BA6NF01 834 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 TNFRSF10CO14798 259 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 CHUKO15111 745 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 SGTAO43765 313 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 KCNJ13O60928 360 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 CDK14O94921 469 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 SYF2O95926 243 aaKnown RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 MT-ND3P03897 115 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 ALDOAP04075 364 aaKnown RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 PCCBP05166 539 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 OR56A5P0C7T3 313 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 ESRRAP11474 423 aaPredicted RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 IMPDH2P12268 514 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 MYCLP1P12525 358 aaPredicted RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 KELP23276 732 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 FMO4P31512 558 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 ADH7P40394 386 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 RABIFP47224 123 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 GIPRP48546 466 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 KIAA1024LP59773 190 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 TIAL1Q01085 375 aaKnown RBP eCLIP7.89□□□□□ -1.15
COPS3-215ENST00000578317 GPS2Q13227 327 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 USP10Q14694 798 aaKnown RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 SMAD1Q15797 465 aaKnown RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 BCL7AQ4VC05 210 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 KHDC1Q4VXA5 237 aaKnown RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 WDR45BQ5MNZ6 344 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 HECTD2Q5U5R9 776 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 FBXW10Q5XX13 1052 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 KYAT3Q6YP21 454 aaKnown RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 MICALCLQ6ZW33 695 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 LPCAT2Q7L5N7 544 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 ADGRG6Q86SQ4 1221 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 TRABD2AQ86V40 505 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 LCA5Q86VQ0 697 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 HEATR4Q86WZ0 1026 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 DCLK2Q8N568 766 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 CLDN19Q8N6F1 224 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 MFSD2AQ8NA29 543 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 GDAP1Q8TB36 358 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 TLCD1Q96CP7 247 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 TSPAN17Q96FV3 270 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 ZC3H10Q96K80 434 aaKnown RBP7.89□□□□□ -1.15
COPS3-215ENST00000578317 DEPDC7Q96QD5 511 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 BOCQ9BWV1 1114 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 LGR4Q9BXB1 951 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 ZSCAN32Q9NX65 697 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 TAS2R13Q9NYV9 303 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 FRRS1LQ9P0K9 344 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 ATXN10Q9UBB4 475 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 TBK1Q9UHD2 729 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 GNPTGQ9UJJ9 305 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 SLC17A4Q9Y2C5 497 aa7.89□□□□□ -1.15
COPS3-215ENST00000578317 FAM95CA0A1B0GW59 222 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 UBA6A0AVT1 1052 aaPredicted RBP7.88□□□□□ -1.15
COPS3-215ENST00000578317 FAM86C2PA6NEL3 165 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 ADARB2-AS1A8MUL3 147 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 HMGB1P1B2RPK0 211 aaPredicted RBP7.88□□□□□ -1.15
COPS3-215ENST00000578317 TRIM49D1C9J1S8 452 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 CACNB4O00305 520 aaPredicted RBP7.88□□□□□ -1.15
COPS3-215ENST00000578317 KPNA5O15131 536 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 INPP4BO15327 924 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 NUAK1O60285 661 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 LILRB5O75023 590 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 WISP3O95389 354 aaPredicted RBP7.88□□□□□ -1.15
COPS3-215ENST00000578317 MPOP05164 745 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 CEACAM5P06731 702 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 SP9P0CG40 484 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 COL6A2P12110 1019 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 STMN1P16949 149 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 KRT15P19012 456 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 FDXRP22570 491 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 HSD3B2P26439 372 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 HTR1BP28222 390 aa7.88□□□□□ -1.15
COPS3-215ENST00000578317 PRLHRP49683 370 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms