RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 ZNF658BQ4V348 819 aaPredicted RBP21.71■■□□□ 1.07
SMARCD2-206ENST00000577990 PHF19Q5T6S3 580 aa21.71■■□□□ 1.07
SMARCD2-206ENST00000577990 OTUD6BQ8N6M0 293 aa21.71■■□□□ 1.07
SMARCD2-206ENST00000577990 WDR36Q8NI36 951 aaKnown RBP21.71■■□□□ 1.07
SMARCD2-206ENST00000577990 CRELD1Q96HD1 420 aa21.71■■□□□ 1.07
SMARCD2-206ENST00000577990 C16orf45Q96MC5 204 aaPredicted RBP21.71■■□□□ 1.07
SMARCD2-206ENST00000577990 INSM2Q96T92 566 aaPredicted RBP21.71■■□□□ 1.07
SMARCD2-206ENST00000577990 TRIM51Q9BSJ1 452 aa21.71■■□□□ 1.07
SMARCD2-206ENST00000577990 SEMA6CQ9H3T2 930 aa21.71■■□□□ 1.07
SMARCD2-206ENST00000577990 SLC40A1Q9NP59 571 aa21.71■■□□□ 1.07
SMARCD2-206ENST00000577990 PTPRQQ9UMZ3 2332 aa21.71■■□□□ 1.07
SMARCD2-206ENST00000577990 PRAMEF33A0A0G2JMD5 474 aa21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 F8W8V4 182 aa21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 TLX3O43711 291 aaPredicted RBP21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 BRINP1O60477 761 aa21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 FTH1P02794 183 aa21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 MTHFD1P11586 935 aaKnown RBP21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 MAPK9P45984 424 aa21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 CFHR1Q03591 330 aa21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 EIF3IQ13347 325 aaKnown RBP21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 ZNF574Q6ZN55 896 aaPredicted RBP21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 LDB1Q86U70 411 aaPredicted RBP21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 SPATA4Q8NEY3 305 aa21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 OR4D9Q8NGE8 314 aa21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 GPR150Q8NGU9 434 aa21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 ZNF669Q96BR6 464 aaPredicted RBP21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 RMDN2Q96LZ7 410 aa21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 C12orf66Q96MD2 445 aa21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 TRIM56Q9BRZ2 755 aaKnown RBP21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 IMP3Q9NV31 184 aaKnown RBP21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 CFAP20Q9Y6A4 193 aaKnown RBP21.7■■□□□ 1.06
SMARCD2-206ENST00000577990 IGHV5-10-1A0A0J9YXX1 117 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 ARCN1P48444 511 aaKnown RBP21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 LIMK2P53671 638 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 RPA4Q13156 261 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 GPR18Q14330 331 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 MORF4L2Q15014 288 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 ANKRD20A4Q4UJ75 823 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 CAPRIN2Q6IMN6 1127 aaKnown RBP21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 MRNIPQ6NTE8 343 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 TMEM71Q6P5X7 295 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 ZNF449Q6P9G9 518 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 RAB11FIP2Q7L804 512 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 PDZD3Q86UT5 571 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 LSMEM2Q8N112 164 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 AGGF1Q8N302 714 aaeCLIP21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 SPDYE1Q8NFV5 336 aaPredicted RBP21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 SIGLEC10Q96LC7 697 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 CCDC74BQ96LY2 380 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 PCDHGA8Q9Y5G5 932 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 MAD1L1Q9Y6D9 718 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 RPS6KL1Q9Y6S9 549 aa21.69■■□□□ 1.06
SMARCD2-206ENST00000577990 SMG1Q96Q15 3661 aaKnown RBP21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 GOLGA8KD6RF30 607 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 GOLGA8TH3BQL2 631 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 PRMT5O14744 637 aaPredicted RBP21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 DXOO77932 396 aaKnown RBP21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 UBXN7O94888 489 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 THRAP10827 490 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 TRA2AQ13595 282 aaKnown RBP eCLIP21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 DNAJC21Q5F1R6 531 aaKnown RBP21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 DUS1LQ6P1R4 473 aaKnown RBP21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 FOXR1Q6PIV2 292 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 WDR74Q6RFH5 385 aaPredicted RBP21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 SDCCAG8Q86SQ7 713 aaPredicted RBP21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 TMEM135Q86UB9 458 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 FBXO39Q8N4B4 442 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 NCSTNQ92542 709 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 ELMO1Q92556 727 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 TMEM159Q96B96 161 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 FCRL3Q96P31 734 aaPredicted RBP21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 OR52A5Q9H2C5 316 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 TMEM9Q9P0T7 183 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 LOXL2Q9Y4K0 774 aa21.68■■□□□ 1.06
SMARCD2-206ENST00000577990 A0A087WV48 116 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 PMS2P1A4D2B8 440 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 SMAPO00193 183 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 LIN7AO14910 233 aaPredicted RBP21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 PLD2O14939 933 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 NDUFS3O75489 264 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 USP1O94782 785 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 MPSTP25325 297 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 PREPP48147 710 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 C2orf54Q08AI8 447 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 IGF2-ASQ6U949 168 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 STAMBPL1Q96FJ0 436 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 SNF8Q96H20 258 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 PRR11Q96HE9 360 aaPredicted RBP21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 TSSK1BQ9BXA7 367 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 TRIM31Q9BZY9 425 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 OGFRQ9NZT2 677 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 HEBP2Q9Y5Z4 205 aa21.67■■□□□ 1.06
SMARCD2-206ENST00000577990 ZCWPW2A0A1B0GU75 182 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 EFCAB8A8MWE9 144 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 IFRD1O00458 451 aaPredicted RBP21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 HGSO14964 777 aaPredicted RBP21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 PFDN6O15212 129 aa21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 SEC31AO94979 1220 aaKnown RBP21.66■■□□□ 1.06
SMARCD2-206ENST00000577990 TYRP1P17643 537 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms