RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 POLNQ7Z5Q5 900 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 MFSD6LQ8IWD5 586 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 RBM12BQ8IXT5 1001 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 KIAA2013Q8IYS2 634 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 KCT2Q8NC54 265 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 HM13Q8TCT9 377 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 GPR151Q8TDV0 419 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 UTP15Q8TED0 518 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 XAGE5Q8WWM1 108 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PSMG2Q969U7 264 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 EFHD2Q96C19 240 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 RNFT2Q96EX2 444 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TUBGCP5Q96RT8 1024 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ZIC5Q96T25 663 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 GPER1Q99527 375 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 FNDC11Q9BVV2 318 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PACSIN1Q9BY11 444 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 OR8D2Q9GZM6 311 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 DNAJC18Q9H819 358 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 RXFP1Q9HBX9 757 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 Q9N2J8 555 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ADAP2Q9NPF8 381 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ZDHHC3Q9NYG2 299 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PCYOX1Q9UHG3 505 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ADGRE2Q9UHX3 823 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 NDUFAF1Q9Y375 327 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SPEF1Q9Y4P9 236 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SAC3D1A6NKF1 404 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 YJEFN3A6XGL0 299 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 A8MVJ9 347 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 H0YC42 278 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TAF4O00268 1085 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TCEA3O75764 348 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 MT-CO1P00395 513 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 APOA1P02647 267 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CYP17A1P05093 508 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ENO1P06733 434 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SFTPCP11686 197 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ICAM2P13598 275 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 HGFP14210 728 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ITGA2P17301 1181 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TFE3P19532 575 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CSNK2A2P19784 350 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 KCNA3P22001 575 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 RPL10P27635 214 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 MPIP34949 423 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 RPL26P61254 145 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 GALK2Q01415 458 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PTSQ03393 145 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 RASGEF1BQ0VAM2 473 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 FAAP100Q0VG06 881 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CNGA3Q16281 694 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 AGKQ53H12 422 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 C3orf38Q5JPI3 329 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 WLSQ5T9L3 541 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CPTPQ5TA50 214 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 SLC25A24Q6NUK1 477 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 FBXL22Q6P050 247 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 UNC5AQ6ZN44 842 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PACS2Q86VP3 889 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PPP1R3BQ86XI6 285 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 ARMC8Q8IUR7 673 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PARP9Q8IXQ6 854 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 CRYBG2Q8N1P7 616 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 TOR1AIP2Q8NFQ8 470 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 NSMCE2Q96MF7 247 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PRMT1Q99873 361 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 C16orf70Q9BSU1 422 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 EFCAB11Q9BUY7 163 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 LGR4Q9BXB1 951 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 FUT8Q9BYC5 575 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 RHOBTB2Q9BYZ6 727 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 PLEKHA1Q9HB21 404 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 HPF1Q9NWY4 346 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 WHRNQ9P202 907 aa2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 RPL26L1Q9UNX3 145 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-203ENST00000577880 RBM47A0AV96 593 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 SCDO00767 359 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 PHGDHO43175 533 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 ZNF208O43345 1280 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 RRP9O43818 475 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 CPNE6O95741 557 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 ALOX5P09917 674 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 ZNF37AP17032 561 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 MYL12AP19105 171 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 TCN1P20061 433 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 AHCYP23526 432 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 S100A5P33763 92 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 PGM1P36871 562 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 GRIA4P48058 902 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 CLK1P49759 484 aaKnown RBP2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 NOMO3P69849 1222 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 RHAGQ02094 409 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 HYAL2Q12891 473 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 MAPK7Q13164 816 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 MAMLD1Q13495 774 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 ITIH4Q14624 930 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 RCN1Q15293 331 aa2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 TAF1AQ15573 450 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-203ENST00000577880 MAPKAPK3Q16644 382 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms