RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 CENPLQ8N0S6 344 aaPredicted RBP9.92□□□□□ -0.82
CRLF3-202ENST00000577725 RBFAQ8N0V3 343 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 CCDC63Q8NA47 563 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 GIMAP7Q8NHV1 300 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 ANKRD49Q8WVL7 239 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 DYDC1Q8WWB3 177 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 TSPAN17Q96FV3 270 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 COPS8Q99627 209 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 MYOCQ99972 504 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 C19orf43Q9BQ61 176 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 MECRQ9BV79 373 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 IQCGQ9H095 443 aaKnown RBP9.92□□□□□ -0.82
CRLF3-202ENST00000577725 FZD3Q9NPG1 666 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 RAD18Q9NS91 495 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 NFKBIL1Q9UBC1 381 aaPredicted RBP9.92□□□□□ -0.82
CRLF3-202ENST00000577725 GNPTGQ9UJJ9 305 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 CNOT6Q9ULM6 557 aaKnown RBP9.92□□□□□ -0.82
CRLF3-202ENST00000577725 RUVBL2Q9Y230 463 aaKnown RBP9.92□□□□□ -0.82
CRLF3-202ENST00000577725 ANKRD6Q9Y2G4 727 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 PLLPQ9Y342 182 aa9.92□□□□□ -0.82
CRLF3-202ENST00000577725 UBR5O95071 2799 aaPredicted RBP9.92□□□□□ -0.82
CRLF3-202ENST00000577725 TBC1D3DA0A087WVF3 549 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TBC1D3IA0A087WXS9 549 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TBC1D3EA0A087X179 549 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 A0A087X1B8 175 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TBC1D3KA0A087X1G2 549 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TBC1D3FA6NER0 549 aaPredicted RBP9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TBC1D3LB9A6J9 549 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 PFDN6O15212 129 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 RAD51BO15315 384 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 PLIN3O60664 434 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 VPS26AO75436 327 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TM7SF2O76062 418 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 DKK1O94907 266 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 ZWINTO95229 277 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 ASMTLO95671 621 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 PROCP04070 461 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TBC1D3HP0C7X1 549 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 CCDC166P0CW27 439 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 CHRM3P20309 590 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 MSH3P20585 1137 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 RPS3P23396 243 aaKnown RBP eCLIP9.91□□□□□ -0.82
CRLF3-202ENST00000577725 ITPKAP23677 461 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 CCT5P48643 541 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 POLD2P49005 469 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 ITIH4Q14624 930 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 IRF4Q15306 451 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 WSCD2Q2TBF2 565 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 C4orf17Q53FE4 359 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TBC1D3GQ6DHY5 549 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TBC1D3CQ6IPX1 549 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 ANO7Q6IWH7 933 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 DOK6Q6PKX4 331 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 PAQR3Q6TCH7 311 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 ZNF765Q7L2R6 523 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TBC1D3Q8IZP1 549 aaPredicted RBP9.91□□□□□ -0.82
CRLF3-202ENST00000577725 HEXDCQ8WVB3 486 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 BTN2A2Q8WVV5 523 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 GLYATL1Q969I3 302 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 FUBP1Q96AE4 644 aaKnown RBP9.91□□□□□ -0.82
CRLF3-202ENST00000577725 NXPE2Q96DL1 559 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 SGF29Q96ES7 293 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 CABS1Q96KC9 395 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 SPACA7Q96KW9 195 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TTC1Q99614 292 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 ZSCAN5AQ9BUG6 496 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 GPAMQ9HCL2 828 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 MBNL1Q9NR56 388 aaKnown RBP9.91□□□□□ -0.82
CRLF3-202ENST00000577725 SMOXQ9NWM0 555 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 TRMT6Q9UJA5 497 aaKnown RBP9.91□□□□□ -0.82
CRLF3-202ENST00000577725 IKZF3Q9UKT9 509 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 PCOLCE2Q9UKZ9 415 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 CORO1CQ9ULV4 474 aaPredicted RBP9.91□□□□□ -0.82
CRLF3-202ENST00000577725 CYP8B1Q9UNU6 501 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 NCKAP1Q9Y2A7 1128 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 VPS9D1Q9Y2B5 631 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 ACOT9Q9Y305 439 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 OAS3Q9Y6K5 1087 aaKnown RBP9.91□□□□□ -0.82
CRLF3-202ENST00000577725 ANKRD12Q6UB98 2062 aa9.91□□□□□ -0.82
CRLF3-202ENST00000577725 IGLV3-16A0A075B6K0 115 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 FAM149AA5PLN7 773 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 OR2AG2A6NM03 316 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 AGAP14A8MT82 685 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 E5RI56 91 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 TM9SF1O15321 606 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 TLX3O43711 291 aaPredicted RBP9.9□□□□□ -0.82
CRLF3-202ENST00000577725 SLC25A14O95258 325 aaPredicted RBP9.9□□□□□ -0.82
CRLF3-202ENST00000577725 ESR1P03372 595 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 LTA4HP09960 611 aaKnown RBP9.9□□□□□ -0.82
CRLF3-202ENST00000577725 DHRS4L1P0CG22 281 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 PBLDP30039 288 aaPredicted RBP9.9□□□□□ -0.82
CRLF3-202ENST00000577725 ACSL1P33121 698 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 LSP1P33241 339 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 PPARGP37231 505 aaPredicted RBP9.9□□□□□ -0.82
CRLF3-202ENST00000577725 ETV4P43268 484 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 SERPINB4P48594 390 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 TPMTP51580 245 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 CTSCP53634 463 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 FOXK1P85037 733 aa9.9□□□□□ -0.82
CRLF3-202ENST00000577725 ZBTB16Q05516 673 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms