RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 CRYBG1Q9Y4K1 1723 aa17.64■□□□□ 0.41
ATPAF1-214ENST00000576409 SMIM30A4D0T7 59 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 TCAF2A6NFQ2 919 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 PLOD3O60568 738 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 KCNA5P22460 613 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 SLC6A2P23975 617 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 SERPINA9Q86WD7 417 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 ANKRD49Q8WVL7 239 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 NSUN3Q9H649 340 aaKnown RBP17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 MALT1Q9UDY8 824 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 CLEC4AQ9UMR7 237 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 WBP11Q9Y2W2 641 aaKnown RBP17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 HS3ST4Q9Y661 456 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 EFCAB9A8MZ26 197 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 DENRO43583 198 aaKnown RBP17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 PQBP1O60828 265 aaKnown RBP17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 CDK4P11802 303 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 NAE1Q13564 534 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 TCF25Q9BQ70 676 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 ACBD6Q9BR61 282 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 RPRD1BQ9NQG5 326 aaKnown RBP17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 SAMD4AQ9UPU9 718 aaKnown RBP17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 NFKBIEO00221 500 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 PSIP1O75475 530 aaKnown RBP17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 CPOXP36551 454 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 KCNQ1P51787 676 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 ARSFP54793 590 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 KCNAB2Q13303 367 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 ALFQ53S48 1182 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 ZNF678Q5SXM1 525 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 TMEM236Q5W0B7 351 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 PAAF1Q9BRP4 392 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 CLN6Q9NWW5 311 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 NUP205Q92621 2012 aa17.63■□□□□ 0.41
ATPAF1-214ENST00000576409 A0A0U1RQS6 177 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 MTX2O75431 263 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 ALPIP09923 528 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 MLLT6P55198 1093 aaPredicted RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 PMS2P3Q13401 168 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 MYBPC3Q14896 1274 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 RNASE12Q5GAN4 147 aaKnown RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 SLC22A16Q86VW1 577 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 KRT73Q86Y46 540 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 CMTR2Q8IYT2 770 aaKnown RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 RPF2Q9H7B2 306 aaKnown RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 NUMBLQ9Y6R0 609 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 FAM234BA2RU67 622 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 ERAL1O75616 437 aaKnown RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 HAPLN1P10915 354 aaPredicted RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 CORO1AP31146 461 aaKnown RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 HPCAL1P37235 193 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 RAB14P61106 215 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 ARMC8Q8IUR7 673 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 FNDC8Q8TC99 324 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 PIH1D2Q8WWB5 315 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 KAT8Q9H7Z6 458 aaKnown RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 POLR3BQ9NW08 1133 aaPredicted RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 MKS1Q9NXB0 559 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 SLC25A13Q9UJS0 675 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 MAGED1Q9Y5V3 778 aaPredicted RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 GLUD1P00367 558 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 IL6P05231 212 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 EPHB3P54753 998 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 OR4D2P58180 307 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 GALNT10Q86SR1 603 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 SMG8Q8ND04 991 aaKnown RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 CNIH3Q8TBE1 160 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 HERC2P3Q9BVR0 1158 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 INTS10Q9NVR2 710 aaKnown RBP17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 SLC9A8Q9Y2E8 581 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 DNAJC15Q9Y5T4 150 aa17.62■□□□□ 0.41
ATPAF1-214ENST00000576409 TNFRSF11BO00300 401 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 INSIG1O15503 277 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 TULP3O75386 442 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 UGT2B4P06133 528 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 PPP2R1BP30154 601 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 SLC5A2P31639 672 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 CHIT1Q13231 466 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 UAP1L1Q3KQV9 507 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 TAPT1Q6NXT6 567 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 KAT2AQ92830 837 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 GFM1Q96RP9 751 aaKnown RBP17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 CCDC182A6NF36 153 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 NME4O00746 187 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 SH3BP2P78314 561 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 CPTPQ5TA50 214 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 ERAP2Q6P179 960 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 FAM131AQ6UXB0 335 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 IFNLR1Q8IU57 520 aaPredicted RBP17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 IL4I1Q96RQ9 567 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 MYOCQ99972 504 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 OCEL1Q9H607 264 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 CCNB1IP1Q9NPC3 277 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 GTF2A1LQ9UNN4 478 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 ARIH1Q9Y4X5 557 aaPredicted RBP17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 CACNA1SQ13698 1873 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 DCLK1O15075 740 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 FFAR2O15552 330 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 OR1I1O60431 355 aa17.61■□□□□ 0.41
ATPAF1-214ENST00000576409 DFNA5O60443 496 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms