RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 CAPRIN2Q6IMN6 1127 aaKnown RBP11.61□□□□□ -0.55
LITAF-219ENST00000576334 TAS2R42Q7RTR8 314 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 SLC13A5Q86YT5 568 aaPredicted RBP11.61□□□□□ -0.55
LITAF-219ENST00000576334 NLGN4XQ8N0W4 816 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 RNF10Q8N5U6 811 aaKnown RBP11.61□□□□□ -0.55
LITAF-219ENST00000576334 AVL9Q8NBF6 648 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 GALNT6Q8NCL4 622 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 PHC3Q8NDX5 983 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 NLGN4YQ8NFZ3 816 aaPredicted RBP11.61□□□□□ -0.55
LITAF-219ENST00000576334 KLHL6Q8WZ60 621 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 WBP1Q96G27 269 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 DCUN1D1Q96GG9 259 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 CDKN2AIPNLQ96HQ2 116 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 COPS8Q99627 209 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 EPB41L1Q9H4G0 881 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 LRRC40Q9H9A6 602 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 AKIRIN1Q9H9L7 192 aaPredicted RBP11.61□□□□□ -0.55
LITAF-219ENST00000576334 NLE1Q9NVX2 485 aaPredicted RBP11.61□□□□□ -0.55
LITAF-219ENST00000576334 DNMT3AQ9Y6K1 912 aaPredicted RBP11.61□□□□□ -0.55
LITAF-219ENST00000576334 COL6A6A6NMZ7 2263 aa11.61□□□□□ -0.55
LITAF-219ENST00000576334 IGLV3-16A0A075B6K0 115 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 TRBV5-4A0A0C4DH59 114 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 CCDC162PA2VCL2 907 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 OR6C74A6NCV1 312 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 MROH6A6NGR9 719 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 KCNJ13O60928 360 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 KIAA0754O94854 1291 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 EBLN1P0CF75 366 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 PLA2G2AP14555 144 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 ACRV1P26436 265 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 PRLHRP49683 370 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 NFATC3Q12968 1075 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 BRD3Q15059 726 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 DBN1Q16643 649 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 SEL1L2Q5TEA6 688 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 PRSS42Q7Z5A4 293 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 ZNF605Q86T29 641 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 ZSCAN1Q8NBB4 408 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 MED8Q96G25 268 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 ZNF514Q96K75 400 aaPredicted RBP11.6□□□□□ -0.55
LITAF-219ENST00000576334 LINC00615Q96LM1 132 aaPredicted RBP11.6□□□□□ -0.55
LITAF-219ENST00000576334 RUFY1Q96T51 708 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 ARHGAP9Q9BRR9 750 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 ULBP3Q9BZM4 244 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 COG4Q9H9E3 785 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 HRASLS2Q9NWW9 162 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 ZDHHC3Q9NYG2 299 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 SLC24A2Q9UI40 661 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 ZNF148Q9UQR1 794 aa11.6□□□□□ -0.55
LITAF-219ENST00000576334 TMEM184BQ9Y519 407 aaPredicted RBP11.6□□□□□ -0.55
LITAF-219ENST00000576334 SPENQ96T58 3664 aaKnown RBP11.59□□□□□ -0.55
LITAF-219ENST00000576334 OR5K3A6NET4 321 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 H7C0S8 307 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 KRT86O43790 486 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 OR1I1O60431 355 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 SPAG6O75602 509 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 SLC35G4P0C7Q5 338 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 ITGB6P18564 788 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 NELFEP18615 380 aaKnown RBP11.59□□□□□ -0.55
LITAF-219ENST00000576334 POLR2CP19387 275 aaPredicted RBP11.59□□□□□ -0.55
LITAF-219ENST00000576334 OAS2P29728 719 aaKnown RBP11.59□□□□□ -0.55
LITAF-219ENST00000576334 CXCR5P32302 372 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 HADHAP40939 763 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 KCNJ1P48048 391 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 KPNA2P52292 529 aaKnown RBP11.59□□□□□ -0.55
LITAF-219ENST00000576334 CCZ1BP86790 482 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 CCZ1P86791 482 aaPredicted RBP11.59□□□□□ -0.55
LITAF-219ENST00000576334 PDE1BQ01064 536 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 PRKG2Q13237 762 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 RASGRP3Q8IV61 690 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 RBM12BQ8IXT5 1001 aaKnown RBP11.59□□□□□ -0.55
LITAF-219ENST00000576334 DNAAF3Q8N9W5 541 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 OR4E2Q8NGC2 313 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 OR13J1Q8NGT2 312 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 ULK4Q96C45 1275 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 ZDHHC12Q96GR4 267 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 SLC41A2Q96JW4 573 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 TEFMQ96QE5 360 aaKnown RBP11.59□□□□□ -0.55
LITAF-219ENST00000576334 KLHL25Q9H0H3 589 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 OR52A5Q9H2C5 316 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 XKR8Q9H6D3 395 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 KIR3DX1Q9H7L2 352 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 GPN2Q9H9Y4 310 aaPredicted RBP11.59□□□□□ -0.55
LITAF-219ENST00000576334 RAB6BQ9NRW1 208 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 SMARCAL1Q9NZC9 954 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 EPHA6Q9UF33 1036 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 ACSL5Q9ULC5 683 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 SPTBP11277 2137 aa11.59□□□□□ -0.55
LITAF-219ENST00000576334 BTN3A3O00478 584 aa11.58□□□□□ -0.56
LITAF-219ENST00000576334 NTRK1P04629 796 aa11.58□□□□□ -0.56
LITAF-219ENST00000576334 FURINP09958 794 aa11.58□□□□□ -0.56
LITAF-219ENST00000576334 RALBP11234 206 aa11.58□□□□□ -0.56
LITAF-219ENST00000576334 MSNP26038 577 aaKnown RBP11.58□□□□□ -0.56
LITAF-219ENST00000576334 FOXN2P32314 431 aa11.58□□□□□ -0.56
LITAF-219ENST00000576334 RPL22P35268 128 aaKnown RBP11.58□□□□□ -0.56
LITAF-219ENST00000576334 STAT5AP42229 794 aa11.58□□□□□ -0.56
LITAF-219ENST00000576334 TERF1P54274 439 aa11.58□□□□□ -0.56
LITAF-219ENST00000576334 CRADDP78560 199 aa11.58□□□□□ -0.56
LITAF-219ENST00000576334 CACNG1Q06432 222 aa11.58□□□□□ -0.56
LITAF-219ENST00000576334 SEMA3AQ14563 771 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms