RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 DCBLD2Q96PD2 775 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 INSM2Q96T92 566 aaPredicted RBP20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 ASCL3Q9NQ33 180 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 PISDQ9UG56 409 aa20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 ANKRD11Q6UB99 2663 aaPredicted RBP20.26■□□□□ 0.83
HCFC1R1-208ENST00000575214 APC2O95996 2303 aa20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 HGSO14964 777 aaPredicted RBP20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 CD3EAPO15446 510 aaKnown RBP20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 FTH1P02794 183 aa20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 GSTM1P09488 218 aa20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 CASQ1P31415 396 aa20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 PTGIRP43119 386 aa20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 ERVPABLB-1P60509 514 aa20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 GSTM4Q03013 218 aa20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 RNASEH2BQ5TBB1 312 aaKnown RBP20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 DUS1LQ6P1R4 473 aaKnown RBP20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 ZNF449Q6P9G9 518 aa20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 LDB1Q86U70 411 aaPredicted RBP20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 SNIP1Q8TAD8 396 aaKnown RBP20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 MARCH4Q9P2E8 410 aaPredicted RBP20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 KLHL3Q9UH77 587 aa20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 PKD1L2Q7Z442 2459 aa20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 CHD6Q8TD26 2715 aa20.25■□□□□ 0.83
HCFC1R1-208ENST00000575214 SDR42E2A6NKP2 422 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 F8W8V4 182 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 CCDC188H7C350 402 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 DNALI1O14645 258 aaPredicted RBP20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 VAPBO95292 243 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 ITGA2BP08514 1039 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 PAMP19021 973 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 ITIH1P19827 911 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 MLLT3P42568 568 aaPredicted RBP20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 TTPAP49638 278 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 ETF1P62495 437 aaKnown RBP20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 DR1Q01658 176 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 KRT33BQ14525 404 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 PLCL1Q15111 1095 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 ARMC3Q5W041 872 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 SYT10Q6XYQ8 523 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 JAMLQ86YT9 394 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 PLXDC1Q8IUK5 500 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 ELMO1Q92556 727 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 OGFRQ9NZT2 677 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 DMXL2Q8TDJ6 3036 aa20.24■□□□□ 0.83
HCFC1R1-208ENST00000575214 ACACAQ13085 2346 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 A8MU76 341 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 IFRD1O00458 451 aaPredicted RBP20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 ARNTP27540 789 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 CSTF2P33240 577 aaKnown RBP eCLIP20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 PREPP48147 710 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 MAPK10P53779 464 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 PCBP4P57723 403 aaKnown RBP20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 RPA4Q13156 261 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 ZNF658BQ4V348 819 aaPredicted RBP20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 KIAA0930Q6ICG6 404 aaPredicted RBP20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 CAPRIN2Q6IMN6 1127 aaKnown RBP20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 SYDE1Q6ZW31 735 aaPredicted RBP20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 PCGF5Q86SE9 256 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 AGBL5Q8NDL9 886 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 JPH3Q8WXH2 748 aaPredicted RBP20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 RSC1A1Q92681 617 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 ZNF669Q96BR6 464 aaPredicted RBP20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 OR52A5Q9H2C5 316 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 HEBP2Q9Y5Z4 205 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 KIF26BQ2KJY2 2108 aa20.23■□□□□ 0.83
HCFC1R1-208ENST00000575214 MAGEB16A2A368 324 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 CDRT15L2A8MXV6 281 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 GOLGA8KD6RF30 607 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 GOLGA8TH3BQL2 631 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 LIN7AO14910 233 aaPredicted RBP20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 RRP8O43159 456 aaKnown RBP20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 NDUFS3O75489 264 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 KRT37O76014 449 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 PDHA2P29803 388 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 CAPZBP47756 277 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 GFERP55789 205 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 BOP1Q14137 746 aaKnown RBP20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 BRD3Q15059 726 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 SYTL3Q4VX76 610 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 IZUMO3Q5VZ72 239 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 MRNIPQ6NTE8 343 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 TRIM56Q9BRZ2 755 aaKnown RBP20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 TSSK1BQ9BXA7 367 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 PDP2Q9P2J9 529 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 MAD1L1Q9Y6D9 718 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 COLEC10Q9Y6Z7 277 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 CFAP47Q6ZTR5 3102 aa20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 MN1Q10571 1320 aaPredicted RBP20.22■□□□□ 0.83
HCFC1R1-208ENST00000575214 FAM237BA0A1B0GVD1 139 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 PRMT5O14744 637 aaPredicted RBP20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 ITGB6P18564 788 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 NDUFS1P28331 727 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 EIF2S3P41091 472 aaKnown RBP20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 ETV5P41161 510 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 MAGEA3P43357 314 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 DHX34Q14147 1143 aaKnown RBP20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 NAPRTQ6XQN6 538 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 LRRC69Q6ZNQ3 347 aa20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 SDCCAG8Q86SQ7 713 aaPredicted RBP20.21■□□□□ 0.83
HCFC1R1-208ENST00000575214 CLEC14AQ86T13 490 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms