RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 SLC6A2P23975 617 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 NSG1P42857 185 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 TMEM102Q8N9M5 508 aaPredicted RBP23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 RHBDF1Q96CC6 855 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 LRRC58Q96CX6 371 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 COPS8Q99627 209 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 C19orf43Q9BQ61 176 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 BRINP2Q9C0B6 783 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 SEMA6AQ9H2E6 1030 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 EGFL7Q9UHF1 273 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 KRT87PA6NCN2 255 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 TTC34A8MYJ7 566 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 PEX1O43933 1283 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 VCLP18206 1134 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 CAMK1Q14012 370 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 RCAN2Q14206 197 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 POM121L1PQ3SYA9 428 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 ATP6AP1LQ52LC2 224 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 ZNF366Q8N895 744 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 PHC3Q8NDX5 983 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 SCAMP4Q969E2 229 aa23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 FARSBQ9NSD9 589 aaKnown RBP23.25■■□□□ 1.31
NPLOC4-217ENST00000574897 MAGEA13PA6NCF6 341 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 PER2O15055 1255 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 MAP3K13O43283 966 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 SLC22A3O75751 556 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 CASP2P42575 452 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 SPINT3P49223 89 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 RHDQ02161 417 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 TIGD2Q4W5G0 525 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 TMEM240Q5SV17 173 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 CAPRIN2Q6IMN6 1127 aaKnown RBP23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 GDPD4Q6W3E5 623 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 MILR1Q7Z6M3 343 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 ICA1LQ8NDH6 482 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 DNAJB14Q8TBM8 379 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 PROKR1Q8TCW9 393 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 MRPL40Q9NQ50 206 aaKnown RBP23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 RIC8BQ9NVN3 520 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 ABCD2Q9UBJ2 740 aa23.24■■□□□ 1.31
NPLOC4-217ENST00000574897 SOX11P35716 441 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 KCNK10P57789 538 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 NR6A1Q15406 480 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 MAP7D1Q3KQU3 841 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 ARHGAP15Q53QZ3 475 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 RABL3Q5HYI8 236 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 RARS2Q5T160 578 aaKnown RBP23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 LRTOMTQ8WZ04 291 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 NR1H4Q96RI1 486 aaPredicted RBP23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 RAD9AQ99638 391 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 CD244Q9BZW8 370 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 CEP44Q9C0F1 390 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 SCOCQ9UIL1 159 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 AP4S1Q9Y587 144 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 A0A1W2PP18 115 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 ZNF839A8K0R7 811 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 TRAP1Q12931 704 aaKnown RBP23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 SERPINA13PQ6UXR4 307 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 TICAM1Q8IUC6 712 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 MINDY1Q8N5J2 469 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 ZNF641Q96N77 438 aaPredicted RBP23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 LRRC3BQ96PB8 259 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 ERVW-1Q9UQF0 538 aa23.23■■□□□ 1.31
NPLOC4-217ENST00000574897 TCRBV3S1A0A5B6 114 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 LSM1O15116 133 aaKnown RBP23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 OTCP00480 354 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 CEBPBP17676 345 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 HMOX2P30519 316 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 GRIA3P42263 894 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 POLR2JP52435 117 aaKnown RBP23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 FOLH1Q04609 750 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 NFYCQ13952 458 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 ARHGEF7Q14155 803 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 RFTN2Q52LD8 501 aaPredicted RBP23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 SLC44A4Q53GD3 710 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 OR52E8Q6IFG1 317 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 ELMSAN1Q6PJG2 1045 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 VRK3Q8IV63 474 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 GALNT4Q8N4A0 578 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 HOPXQ9BPY8 73 aaPredicted RBP23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 OPTCQ9UBM4 332 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 ANGPTL3Q9Y5C1 460 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 PLXNA2O75051 1894 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 RANBP2P49792 3224 aaKnown RBP23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 LEFTY1O75610 366 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 G6PDP11413 515 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 HSPA14Q0VDF9 509 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 MED21Q13503 144 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 ISLR2Q6UXK2 745 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 HSD11B1LQ7Z5J1 315 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 DHFR2Q86XF0 187 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 ST13P5Q8NFI4 369 aaPredicted RBP23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 SP7Q8TDD2 431 aaPredicted RBP23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 MRGPRX3Q96LB0 322 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 SPATA16Q9BXB7 569 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 ACTL8Q9H568 366 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 KCTD5Q9NXV2 234 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 RNF11Q9Y3C5 154 aa23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 POLR3HQ9Y535 204 aaPredicted RBP23.22■■□□□ 1.31
NPLOC4-217ENST00000574897 CCDC154A6NI56 674 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms