RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 PRSS21Q9Y6M0 314 aa16.91■□□□□ 0.3
SMG6-212ENST00000573153 BOD1L1Q8NFC6 3051 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 IGHV5-51A0A0C4DH38 117 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 STK17BO94768 372 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 TIAF1O95411 115 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 CDH17Q12864 832 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 SEMA5AQ13591 1074 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 DBN1Q16643 649 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 TAF1BQ53T94 588 aaPredicted RBP16.9■□□□□ 0.3
SMG6-212ENST00000573153 CERS6Q6ZMG9 384 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 SERPINA9Q86WD7 417 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 CACNA2D3Q8IZS8 1091 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 OR52K1Q8NGK4 314 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 HM13Q8TCT9 377 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 MAIP1Q8WWC4 291 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 RNF31Q96EP0 1072 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 ZNF778Q96MU6 729 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 TWSG1Q9GZX9 223 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 ZMYND15Q9H091 742 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 ZDHHC3Q9NYG2 299 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 SLC24A2Q9UI40 661 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 CRLS1Q9UJA2 301 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 ACSL5Q9ULC5 683 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 RIMKLBQ9ULI2 386 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 ZNF148Q9UQR1 794 aa16.9■□□□□ 0.3
SMG6-212ENST00000573153 HELZ2Q9BYK8 2649 aaKnown RBP16.89■□□□□ 0.29
SMG6-212ENST00000573153 C17orf113A0A1B0GUU1 675 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 OR51F1A6NGY5 319 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 ITGB2P05107 769 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 RALBP11234 206 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 ATP1B2P14415 290 aaPredicted RBP16.89■□□□□ 0.29
SMG6-212ENST00000573153 AMD1P17707 334 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 NELFEP18615 380 aaKnown RBP16.89■□□□□ 0.29
SMG6-212ENST00000573153 F8A1P23610 371 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 HALP42357 657 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 SEPHS1P49903 392 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 ACVR1Q04771 509 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 TBR1Q16650 682 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 KCTD19Q17RG1 926 aaPredicted RBP16.89■□□□□ 0.29
SMG6-212ENST00000573153 CEACAM20Q6UY09 585 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 C4orf22Q6V702 233 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 FAM92BQ6ZTR7 304 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 CLDN19Q8N6F1 224 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 ZFPM2Q8WW38 1151 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 EXTL1Q92935 676 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 MED8Q96G25 268 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 PPM1MQ96MI6 270 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 RANBP9Q96S59 729 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 COPS8Q99627 209 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 ZPBPQ9BS86 351 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 KIR3DX1Q9H7L2 352 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 COG4Q9H9E3 785 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 IMP3Q9NV31 184 aaKnown RBP16.89■□□□□ 0.29
SMG6-212ENST00000573153 PAK5Q9P286 719 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 SLC2A6Q9UGQ3 507 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 PCDHB11Q9Y5F2 797 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 PIEZO2Q9H5I5 2752 aa16.89■□□□□ 0.29
SMG6-212ENST00000573153 OR5K3A6NET4 321 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 CFAP99D6REC4 459 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 IFNB1P01574 187 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 ZSCAN5DPP0CG00 497 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 FGF5P12034 268 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 PDHA2P29803 388 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 CACNG1Q06432 222 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 C19orf57Q0VDD7 668 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 LAMB3Q13751 1172 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 MAP7Q14244 749 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 CCDC38Q502W7 563 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 ZNF534Q76KX8 674 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 UNC5BQ8IZJ1 945 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 NLGN4XQ8N0W4 816 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 NLGN4YQ8NFZ3 816 aaPredicted RBP16.88■□□□□ 0.29
SMG6-212ENST00000573153 PEX13Q92968 403 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 DCUN1D1Q96GG9 259 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 SLC45A3Q96JT2 553 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 C12orf66Q96MD2 445 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 MAP3K3Q99759 626 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 CASS4Q9NQ75 786 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 EIF2B3Q9NR50 452 aaKnown RBP16.88■□□□□ 0.29
SMG6-212ENST00000573153 IL17BQ9UHF5 180 aa16.88■□□□□ 0.29
SMG6-212ENST00000573153 CCDC78A2IDD5 438 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 CCDC162PA2VCL2 907 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 POLR1CO15160 346 aaPredicted RBP16.87■□□□□ 0.29
SMG6-212ENST00000573153 FGGP02679 453 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 GSTM1P09488 218 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 PLA2G2AP14555 144 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 FOLR1P15328 257 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 STAT5AP42229 794 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 ATP1A2P50993 1020 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 KPNA2P52292 529 aaKnown RBP16.87■□□□□ 0.29
SMG6-212ENST00000573153 GSTM4Q03013 218 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 SEMA3AQ14563 771 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 SKIDA1Q1XH10 827 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 CACHD1Q5VU97 1274 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 IRGCQ6NXR0 463 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 CCDC89Q8N998 374 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 SGSM3Q96HU1 749 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 OR6C1Q96RD1 312 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 GRPEL1Q9HAV7 217 aa16.87■□□□□ 0.29
SMG6-212ENST00000573153 RAB6BQ9NRW1 208 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms