RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MTX2O75431 263 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 ZNF189O75820 626 aaPredicted RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 FTCDO95954 541 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 CELA3AP09093 270 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 F3P13726 295 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 SLC2A4P14672 509 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 ZNF7P17097 686 aaPredicted RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 XRCC1P18887 633 aaPredicted RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 UGT1A6P19224 532 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 ITIH1P19827 911 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 LPOP22079 712 aaPredicted RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 UGT1A1P22309 533 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 UGT1A4P22310 534 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 NME2P22392 152 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 PSMB4P28070 264 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 SLC5A2P31639 672 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 ADRA1AP35348 466 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 UGT1A3P35503 534 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 SPAM1P38567 509 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 PPM1FP49593 454 aaPredicted RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 LIMK2P53671 638 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 MAPK10P53779 464 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 HHEXQ03014 270 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 TLE3Q04726 772 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 NFATC2Q13469 925 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 TRA2AQ13595 282 aaKnown RBP eCLIP7.32□□□□□ -1.24
NUP88-205ENST00000572809 GTF2H3Q13889 308 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 COL9A2Q14055 689 aaPredicted RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 KIR2DS5Q14953 304 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 TAF1AQ15573 450 aaPredicted RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 CHRNA6Q15825 494 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 INSCQ1MX18 579 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 TMEM71Q6P5X7 295 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 GPR155Q7Z3F1 870 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 GLT6D1Q7Z4J2 308 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 CLEC14AQ86T13 490 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 SLC9B2Q86UD5 537 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 LRRTM4Q86VH4 590 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 ZNF761Q86XN6 746 aaPredicted RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 JAMLQ86YT9 394 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 OR4D9Q8NGE8 314 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 OR10G6Q8NH81 332 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 CCDC110Q8TBZ0 833 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 ZNF398Q8TD17 642 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 UBE2Q2Q8WVN8 375 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 AHCYL2Q96HN2 611 aaKnown RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 SPATA13Q96N96 652 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 GORASP1Q9BQQ3 440 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 NUDT22Q9BRQ3 303 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 FICDQ9BVA6 458 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 STN1Q9H668 368 aaKnown RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 UGT1A7Q9HAW7 530 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 UGT1A10Q9HAW8 530 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 UGT1A8Q9HAW9 530 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 SARS2Q9NP81 518 aaKnown RBP7.32□□□□□ -1.24
NUP88-205ENST00000572809 PRDM8Q9NQV8 689 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 PISDQ9UG56 409 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 TMPRSS11EQ9UL52 423 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 SOX13Q9UN79 622 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 TRIM33Q9UPN9 1127 aa7.32□□□□□ -1.24
NUP88-205ENST00000572809 DSPP15924 2871 aaKnown RBP7.31□□□□□ -1.24
NUP88-205ENST00000572809 ZFHX4Q86UP3 3567 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 GLYATL1P3A0A0U1RQE8 302 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 A6NCN8 305 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 HGSO14964 777 aaPredicted RBP7.31□□□□□ -1.24
NUP88-205ENST00000572809 KRT86O43790 486 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 KCNJ13O60928 360 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 CRTAMO95727 393 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 VCLP18206 1134 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 IDSP22304 550 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 CSTF2P33240 577 aaKnown RBP eCLIP7.31□□□□□ -1.24
NUP88-205ENST00000572809 ETV5P41161 510 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 ARL4DP49703 201 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 UCNP55089 124 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 TMPRSS3P57727 454 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 GSDMDP57764 484 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 CXADRP78310 365 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 PDE1BQ01064 536 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 CFHR1Q03591 330 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 OLIG2Q13516 323 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 ITGA9Q13797 1035 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 PTPRCAPQ14761 206 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 C16orf72Q14CZ0 275 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 PARP6Q2NL67 630 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 KHDC1Q4VXA5 237 aaKnown RBP7.31□□□□□ -1.24
NUP88-205ENST00000572809 SOWAHCQ53LP3 525 aaPredicted RBP7.31□□□□□ -1.24
NUP88-205ENST00000572809 SNAP47Q5SQN1 464 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 LDLRAP1Q5SW96 308 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 CRTC3Q6UUV7 619 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 SHISA2Q6UWI4 295 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 ABRAXAS1Q6UWZ7 409 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 FAM151BQ6UXP7 276 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 VN1R5Q7Z5H4 357 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 ZNF547Q8IVP9 402 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 RCBTB1Q8NDN9 531 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 NCSTNQ92542 709 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 USP7Q93009 1102 aa7.31□□□□□ -1.24
NUP88-205ENST00000572809 LRRC45Q96CN5 670 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms