RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 BPTFQ12830 3046 aa20.22■□□□□ 0.83
CHMP6-204ENST00000572778 HGSO14964 777 aaPredicted RBP20.21■□□□□ 0.83
CHMP6-204ENST00000572778 FANCGO15287 622 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 RRP8O43159 456 aaKnown RBP20.21■□□□□ 0.83
CHMP6-204ENST00000572778 VAPBO95292 243 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 FTH1P02794 183 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 GSTM1P09488 218 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 CSTF2P33240 577 aaKnown RBP eCLIP20.21■□□□□ 0.83
CHMP6-204ENST00000572778 EIF2S3P41091 472 aaKnown RBP20.21■□□□□ 0.83
CHMP6-204ENST00000572778 MLLT3P42568 568 aaPredicted RBP20.21■□□□□ 0.83
CHMP6-204ENST00000572778 PCBP4P57723 403 aaKnown RBP20.21■□□□□ 0.83
CHMP6-204ENST00000572778 GSTM4Q03013 218 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 PLCL1Q15111 1095 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 PLXDC1Q8IUK5 500 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 PPIL6Q8IXY8 311 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 NAT8LQ8N9F0 302 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 ELMO1Q92556 727 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 NAF1Q96HR8 494 aaKnown RBP20.21■□□□□ 0.83
CHMP6-204ENST00000572778 RMDN2Q96LZ7 410 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 SERPINB12Q96P63 405 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 OGFRQ9NZT2 677 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 PCYOX1Q9UHG3 505 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 FREM2Q5SZK8 3169 aa20.21■□□□□ 0.83
CHMP6-204ENST00000572778 ZFC3H1O60293 1989 aaKnown RBP20.21■□□□□ 0.83
CHMP6-204ENST00000572778 EPG5Q9HCE0 2579 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 SDR42E2A6NKP2 422 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 CDRT15L2A8MXV6 281 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 F8W8V4 182 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 IFRD1O00458 451 aaPredicted RBP20.2■□□□□ 0.82
CHMP6-204ENST00000572778 CCL4P13236 92 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 PDHA2P29803 388 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 CASQ1P31415 396 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 ETV5P41161 510 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 PTGIRP43119 386 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 PREPP48147 710 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 TTPAP49638 278 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 PTK6Q13882 451 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 BRD3Q15059 726 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 CAPRIN2Q6IMN6 1127 aaKnown RBP20.2■□□□□ 0.82
CHMP6-204ENST00000572778 LRRC69Q6ZNQ3 347 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 AGBL5Q8NDL9 886 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 ZNF248Q8NDW4 579 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 HNRNPLLQ8WVV9 542 aaKnown RBP20.2■□□□□ 0.82
CHMP6-204ENST00000572778 RSC1A1Q92681 617 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 PDP2Q9P2J9 529 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 RNF14Q9UBS8 474 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 COLEC10Q9Y6Z7 277 aa20.2■□□□□ 0.82
CHMP6-204ENST00000572778 MAGEB16A2A368 324 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 GOLGA8KD6RF30 607 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 GOLGA8TH3BQL2 631 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 NDUFS3O75489 264 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 KRT37O76014 449 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 ITGB6P18564 788 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 PAMP19021 973 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 GFERP55789 205 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 RPA4Q13156 261 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 ZNF658BQ4V348 819 aaPredicted RBP20.19■□□□□ 0.82
CHMP6-204ENST00000572778 C19orf48Q6RUI8 117 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 NAPRTQ6XQN6 538 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 SLCO2A1Q92959 643 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 RUNDC3BQ96NL0 473 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 TGM7Q96PF1 710 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 OR52A5Q9H2C5 316 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 HEBP2Q9Y5Z4 205 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 USP24Q9UPU5 2620 aa20.19■□□□□ 0.82
CHMP6-204ENST00000572778 A0A087WV48 116 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 CCDC188H7C350 402 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 DNALI1O14645 258 aaPredicted RBP20.18■□□□□ 0.82
CHMP6-204ENST00000572778 LIN7AO14910 233 aaPredicted RBP20.18■□□□□ 0.82
CHMP6-204ENST00000572778 CAPN5O15484 640 aaPredicted RBP20.18■□□□□ 0.82
CHMP6-204ENST00000572778 ARNTP27540 789 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 SLC5A2P31639 672 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 CAPZBP47756 277 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 DR1Q01658 176 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 BOP1Q14137 746 aaKnown RBP20.18■□□□□ 0.82
CHMP6-204ENST00000572778 SYTL3Q4VX76 610 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 RNASEH2BQ5TBB1 312 aaKnown RBP20.18■□□□□ 0.82
CHMP6-204ENST00000572778 SYDE1Q6ZW31 735 aaPredicted RBP20.18■□□□□ 0.82
CHMP6-204ENST00000572778 ARHGAP22Q7Z5H3 698 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 SDCCAG8Q86SQ7 713 aaPredicted RBP20.18■□□□□ 0.82
CHMP6-204ENST00000572778 CLEC14AQ86T13 490 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 FAM129CQ86XR2 697 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 USP7Q93009 1102 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 FERD3LQ96RJ6 166 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 TRIM56Q9BRZ2 755 aaKnown RBP20.18■□□□□ 0.82
CHMP6-204ENST00000572778 PCDHGA7Q9Y5G6 932 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 MAD1L1Q9Y6D9 718 aa20.18■□□□□ 0.82
CHMP6-204ENST00000572778 UNC13CQ8NB66 2214 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 FAM237BA0A1B0GVD1 139 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 UBA6A0AVT1 1052 aaPredicted RBP20.17■□□□□ 0.82
CHMP6-204ENST00000572778 EFCAB7A8K855 629 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 PRMT5O14744 637 aaPredicted RBP20.17■□□□□ 0.82
CHMP6-204ENST00000572778 FGF3P11487 239 aaPredicted RBP20.17■□□□□ 0.82
CHMP6-204ENST00000572778 NDUFS1P28331 727 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 ETF1P62495 437 aaKnown RBP20.17■□□□□ 0.82
CHMP6-204ENST00000572778 DHX34Q14147 1143 aaKnown RBP20.17■□□□□ 0.82
CHMP6-204ENST00000572778 ANKRD20A4Q4UJ75 823 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 IZUMO3Q5VZ72 239 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 ARMC3Q5W041 872 aa20.17■□□□□ 0.82
CHMP6-204ENST00000572778 KIAA0930Q6ICG6 404 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms