RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 KIAA1143Q96AT1 154 aaPredicted RBP16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 DCUN1D1Q96GG9 259 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 INSM2Q96T92 566 aaPredicted RBP16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 TMEM121Q9BTD3 319 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 GPN2Q9H9Y4 310 aaPredicted RBP16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ZDHHC3Q9NYG2 299 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 TUBD1Q9UJT1 453 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 RIMKLBQ9ULI2 386 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 PSMD13Q9UNM6 376 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 HEBP2Q9Y5Z4 205 aa16.69■□□□□ 0.26
MAP1LC3B-208ENST00000570189 LOC101059948A0A1B0GTJ6 334 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 TCRBV7S2A1N4TA0A589 114 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 TLCD2A6NGC4 264 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 KRT86O43790 486 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 KIF1CO43896 1103 aaKnown RBP16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SUN1O94901 812 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SLC35G4P0C7Q5 338 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 MC4RP32245 332 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CD151P48509 253 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 RPA4Q13156 261 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SPARCL1Q14515 664 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 IRGCQ6NXR0 463 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 DET1Q7L5Y6 550 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CDKN2AIPNLQ96HQ2 116 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 DNAJC1Q96KC8 554 aaKnown RBP16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 RMDN2Q96LZ7 410 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 C12orf66Q96MD2 445 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 OR6C1Q96RD1 312 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 WWP1Q9H0M0 922 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 VPS37BQ9H9H4 285 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 WDR70Q9NW82 654 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 GEMIN8Q9NWZ8 242 aaKnown RBP16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SLC24A2Q9UI40 661 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 COLEC10Q9Y6Z7 277 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SPTA1P02549 2419 aa16.68■□□□□ 0.26
MAP1LC3B-208ENST00000570189 IGHV5-51A0A0C4DH38 117 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 QSOX1O00391 747 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 TERTO14746 1132 aaKnown RBP16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ARHGAP6O43182 974 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 LIASO43766 372 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 RASSF9O75901 435 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 AP2A2O94973 939 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 RECKO95980 971 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 MT-ND3P03897 115 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 FDFT1P37268 417 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SH3BP2P78314 561 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 MC1RQ01726 317 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CACNG1Q06432 222 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 FOXM1Q08050 763 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 LAMB3Q13751 1172 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SEL1L2Q5TEA6 688 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 BORAQ6PGQ7 559 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 PACS1Q6VY07 963 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 OOSP2Q86WS3 158 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 D2HGDHQ8N465 521 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SPC24Q8NBT2 197 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ARHGAP9Q9BRR9 750 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ULBP3Q9BZM4 244 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 OR52A5Q9H2C5 316 aa16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 IMP3Q9NV31 184 aaKnown RBP16.67■□□□□ 0.26
MAP1LC3B-208ENST00000570189 MATN2O00339 956 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 PBLDP30039 288 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SEPHS1P49903 392 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 PPP1CAP62136 330 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CYP4F2P78329 520 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CDH17Q12864 832 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ITIH4Q14624 930 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 PLCL1Q15111 1095 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SKIDA1Q1XH10 827 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 C6orf15Q6UXA7 325 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 FAM92BQ6ZTR7 304 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SERPINA9Q86WD7 417 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 PPP1R3BQ86XI6 285 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SLC13A5Q86YT5 568 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SPDYE1Q8NFV5 336 aaPredicted RBP16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 PEX13Q92968 403 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 RANBP9Q96S59 729 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 FAM117AQ9C073 453 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 COG4Q9H9E3 785 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 PDE7BQ9NP56 450 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 BTRCQ9Y297 605 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 PCDHGA6Q9Y5G7 932 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 RPS6KL1Q9Y6S9 549 aa16.66■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SPAG6O75602 509 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 MSL3P1P0C860 447 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ZNF28P17035 718 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 NSG1P42857 185 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 HSD11B2P80365 405 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 TMPRSS15P98073 1019 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ACY1Q03154 408 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 ACVR1Q04771 509 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CDC20Q12834 499 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SEMA5AQ13591 1074 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 POU6F1Q14863 301 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 DNTTIP2Q5QJE6 756 aaKnown RBP16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 MEI1Q5TIA1 1274 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 DRICH1Q6PGQ1 229 aaPredicted RBP16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 PIANPQ8IYJ0 282 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 CFAP206Q8IYR0 622 aa16.65■□□□□ 0.26
MAP1LC3B-208ENST00000570189 SIDT2Q8NBJ9 832 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms